| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1139 |
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| Symbol | |
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| ID | 8418966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1335301 |
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| End bp | 1336608 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037713 |
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| Product | Phenylacetate--CoA ligase |
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| Protein accession | YP_003198005 |
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| Protein GI | 258405263 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1541] Coenzyme F390 synthetase |
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| TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000376262 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTACG ATGTGGAAAA GGAAACCTTG CCCCGCGAAG AACTCGAAGC ATTGCAATTG
CGCAAGTTGC AGTCCCTCGT GGAGCGCGTC TACTACAACG TGCCCTTCTA TCGCGAAAAA
CTGGATGAAG CCGGAGTCAG GCCCGAAGAC ATCCGCAGCC TGCGGGATGT ACAATTCCTC
CCGTTTACCG AAAAGCAGGA TCTGCGCAAC AATTACCCCT TTGGCCTCTT TGCCGTCCCC
CGCGAAAATG TCGTCCGCAT CCACGCCTCT TCCGGAACGA CTGGCAAGGC CACTGTCGTC
GGCTATACCC AGCGCGATGT CCGCAATTGG GCCACGCTCA TGGCCCGTTC GCTGATGGCC
GCCGGAGCGA CACGGCGGGA CACCGTGCAC AACGCTTACG GCTACGGGTT GTTTACCGGC
GGCCTGGGCG TCCATTACGG CGCGGAACAA CTCGGGGCCT CTATCGTGCC CATTTCAGGC
GGCGGCACCA AGCGCCAGGC CACCCTGCTC AAGGACTTCG GCCCCACTGT CATCTGCTGC
ACCCCTTCCT ACGCCCTGCA TCTCTATGAA ACGGCCAAGG CCGGTGGCCT GGATGTTGAA
AATCTTCCCC TGCACACCGG AATCTTCGGC GCCGAACCTT GGACCGACGA AATGCGAGCC
GACCTCGAAT CCAAGCTGGG CATCAAGGCC TTGGACATCT ATGGTCTGTC CGAGATCATG
GGACCCGGCG TCGCCATGGA ATGCCGCCCC GCCCAGGACG GGCTGCATAT CTGGGAAGAC
CACTTCCTGG TCGAGACCAT CGATCCCGAA ACCGGGGAAC AGCTTGCTCC CGGGGAGACC
GGGGAATTGG TGATCACGAC GCTGTCCAAG GAGGCGCAGC CGCTCCTGCG CTACCGCACC
CGGGACCTGA CCCGCCTGAA CACCGTCCCC TGCCGCTGCG GGCGGACCCA TACCCGTATG
GCCCGGGTCA TGGGACGCAG TGACGACATG CTCATCATCC GTGGCGTGAA CGTCTTTCCG
TCGCAAATCG AGAGCATCCT GCTCGAAACC GAGGGCATTG CGCCGCACTA CCAGCTCATC
CTGCGCCGTC ACGGTTCGCT GGACACACTT GAAATCCACG TCGAAATCGA CGATTCCACT
TTCTCCGACG AGATCAAGCA TTTACAACGT CTTGAGCGCA AGATACAGAA AAACATCAAA
GAGTTCCTGG GTGTGACCGC GGATATCAAG CTCGCCGAAC CGATGAGTAT CGCCCGCTCC
CAGGGCAAAG CCCAGCGGAT TATCGATCGT CGCCACGAAG CCGAATAA
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| Protein sequence | MLYDVEKETL PREELEALQL RKLQSLVERV YYNVPFYREK LDEAGVRPED IRSLRDVQFL
PFTEKQDLRN NYPFGLFAVP RENVVRIHAS SGTTGKATVV GYTQRDVRNW ATLMARSLMA
AGATRRDTVH NAYGYGLFTG GLGVHYGAEQ LGASIVPISG GGTKRQATLL KDFGPTVICC
TPSYALHLYE TAKAGGLDVE NLPLHTGIFG AEPWTDEMRA DLESKLGIKA LDIYGLSEIM
GPGVAMECRP AQDGLHIWED HFLVETIDPE TGEQLAPGET GELVITTLSK EAQPLLRYRT
RDLTRLNTVP CRCGRTHTRM ARVMGRSDDM LIIRGVNVFP SQIESILLET EGIAPHYQLI
LRRHGSLDTL EIHVEIDDST FSDEIKHLQR LERKIQKNIK EFLGVTADIK LAEPMSIARS
QGKAQRIIDR RHEAE
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