Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1136 |
Symbol | |
ID | 8418963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1332472 |
End bp | 1333332 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645037710 |
Product | inner-membrane translocator |
Protein accession | YP_003198002 |
Protein GI | 258405260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0602243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTGGC AGCAAATCGT GAACGGAATC GTGGCCGGGT CGGCCTACGC CCTGGTCGCC CTGGGCTATT CCCTGATCTA CGGGGTGTTG GGGCTGATCA ACCTGGCTCA GGGCGAAATC TATATGGCCG GGGCCTTCGG CCTCTGGATA GCGGCCGCGG TCCTCGGCCT ACCGTTGCCC CTGGCCGTGC TCTTTGGCCT GCTGTTCTCG GCAGTGGTCG GATTGAGCAT GGAGCGGGTG GTGTTCCGGC CGCTGACAGG ACGTCATCCA CTGATCCCCT TGTTGGCTGC CATCGGTTTG TCCATTTTTC TTCAGTCCGT TGCCTTGCTG GCCTTTGGCC CGGAAACCCG TCCCTTTCCT CTGGAATTCG AGCCGCAGCT CTGGAATCTG GGGCCAGTCA CCCTCTCCAC GCTGCAGTTG CTGCTGGTCA CAACTGCACT CGCGCTGATG GGCGGACTGT TCTGGTATGT CCATGCCAGC CGCCACGGTC AGGCCTTGCA GGCCGTGGCC ATGGACCGTG AAGCCGCGCG GCTCGTGGGC ATCAAACCCC ATCAATGCGT GGCCCAGGCA TTCGGCATCG GCGGCATGCT CAGCGGAGCC GCGGGGATGA TGATGGCGGC CTATTACAAC GCCACCTACC CCTACATGGG AGTGCTGCCG GGACTGAAAG GGTTTTGCGC CGCCGTGCTC GGCGGAGCGG GATCGATCCC CGGGGCCATT CTCGGGGGAC TTATTCTGGG CCTTTCCGAA AACCTCGGTG CCGCCTACAT CCACTCCGGG TTCAAGGACG GCTACGCGTT CGCTATTTTG ATCGCCATCC TGCTTTTGCG CCCCCAGGGG CTCTTGGGCA AATCCAAATA A
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Protein sequence | MIWQQIVNGI VAGSAYALVA LGYSLIYGVL GLINLAQGEI YMAGAFGLWI AAAVLGLPLP LAVLFGLLFS AVVGLSMERV VFRPLTGRHP LIPLLAAIGL SIFLQSVALL AFGPETRPFP LEFEPQLWNL GPVTLSTLQL LLVTTALALM GGLFWYVHAS RHGQALQAVA MDREAARLVG IKPHQCVAQA FGIGGMLSGA AGMMMAAYYN ATYPYMGVLP GLKGFCAAVL GGAGSIPGAI LGGLILGLSE NLGAAYIHSG FKDGYAFAIL IAILLLRPQG LLGKSK
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