| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1105 |
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| Symbol | |
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| ID | 8418930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1297323 |
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| End bp | 1298204 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037677 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_003197971 |
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| Protein GI | 258405229 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0497695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0196735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCGCATTG CTGATTTGAT GCAACCGGGC AAGAAATTTA TTTCTCTTGA ATTTTTCCCC
CCCAAGGACG AGGGGAACTG GCCCGGTTTT TTTGAGGAAG TACACCAATT GGCGAGTATG
GATCCGCTTT TTGTCTCCGT GACCTACGGC GCCGGTGGAA GCACGCAGGA CAATACCTTG
CGTCTGGTCA GCCGATTGAA GCAGATGGGA CTGGAGCCCA TGGCGCATTT GACCTGCGTT
GGAGCCTCAG CCGCCACTCT CCACGACTTC ATGCGTTCCC TTCAGGCGTC AGACATCGAT
AATGTCCTCG CCCTGCGCGG TGACCCGCCC CAGGGGCAGG ACACCTTCGT CCCCGATAAT
GCGGATTTCC AACATGCCAG TGATCTTGTC CGGTTTCTTC GGGAGCATTA CCCCGAATGC
GGCATCGGGG TGGCCGGCTA TCCCGAGGGC CATCAAGAAG CCCCGGATTT CGAGACCGAC
CTTGACTATC TGGGGTTGAA GTTCCAAACC GGCGGGGACT TTGCCATTAC GCAGATGTTT
TTTGACAACG CCATGTATTG GCGCATGCTC GATCAAGCCC AGGCCAAAGG CATCACCAAA
CCGATTGTGC CTGGGATTTT GCCGATCATG CATCTCAATA CCGTGAAACG CATCTCCTCC
CTCTGCGGGG CGACCCTACC GCCGGCTTTT CTGCAGCAAC TGGAGGAGGC CGAGGCCGAA
GGCGGTCCAG CGGCGGTTAA AGATGTGGGA ATCAAGTATG CCACTGAACA GGTGCGCGAT
CTTCTGGCCG GCGGCGCGCC GGGCGTCCAC CTGTACACTT TGAACAAGTC CGAGGCGTGT
TTGCGAATTT ATCGTGAACT CAACGCCTGT TTGTGTGAAT AA
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| Protein sequence | MRIADLMQPG KKFISLEFFP PKDEGNWPGF FEEVHQLASM DPLFVSVTYG AGGSTQDNTL
RLVSRLKQMG LEPMAHLTCV GASAATLHDF MRSLQASDID NVLALRGDPP QGQDTFVPDN
ADFQHASDLV RFLREHYPEC GIGVAGYPEG HQEAPDFETD LDYLGLKFQT GGDFAITQMF
FDNAMYWRML DQAQAKGITK PIVPGILPIM HLNTVKRISS LCGATLPPAF LQQLEEAEAE
GGPAAVKDVG IKYATEQVRD LLAGGAPGVH LYTLNKSEAC LRIYRELNAC LCE
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