Gene Dret_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1098 
Symbol 
ID8418923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1288017 
End bp1288523 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID645037670 
Productprotein of unknown function DUF456 
Protein accessionYP_003197964 
Protein GI258405222 
COG category[S] Function unknown 
COG ID[COG2839] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0512381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATT TTCTGGTAGG ACTCTTCCTG TTGGTCATAT TATTTGTGGC CGCCTCCAAT 
GTATTCGGTT TGCCGGGCAA CTGGATCAAC CTGGGGTTGA TCGCTTTGTG GAAATGGGCG
CACCCCGGCA TGGAAGCGGG ATGGGGCTTT TTCCTGGCTT TGCTGGCTAT CGCCGGTATT
GGTGAACTGC TTGAATTCGG TTCGCAATTC TGGGGGGCCA AGAAATACGG CGGCAGTACC
AAAGGAAGCT GGGGGGCGCT GGCCGGCGCC CTTGTCGGGG CTGTCCTCGG CGCTCCTTTG
TTCATGGGCA TAGGCGCTTT TTTGGGCGCA CTGGCCGGGG CGTTTGTGGG CGCGTTCGCT
GTCGAAATCA TCCGCTCGCG CCCTTGGCCC GAAGCTCTGA GGGCGGCCAA GGGAGCGATG
TTCGGCCGGG TTTTGGGCAC GGTCGCCAAG TTGGGGTTGG GGATTTTGAT GCTGGCTTTG
ACCATGCCCC GGGTCTGGCC AGCCTAG
 
Protein sequence
MSYFLVGLFL LVILFVAASN VFGLPGNWIN LGLIALWKWA HPGMEAGWGF FLALLAIAGI 
GELLEFGSQF WGAKKYGGST KGSWGALAGA LVGAVLGAPL FMGIGAFLGA LAGAFVGAFA
VEIIRSRPWP EALRAAKGAM FGRVLGTVAK LGLGILMLAL TMPRVWPA