| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1097 |
|---|
| Symbol | |
|---|
| ID | 8418922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1286405 |
|---|
| End bp | 1287850 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645037669 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_003197963 |
|---|
| Protein GI | 258405221 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.513997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0220544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGA AGAACAACCC AAAGAACAAC AAGAAGAGGA ATAACTCCAC CGGGAGCAGT
TCGTCTTCAG CACAAGGGCT GGACAAGGTC TCCAAAGACC TTGTCCGCCG TTTACCCCCC
CAGAATCTCG AGGCCGAACA GGCGGTTTTG GGGGGGGTTT TTTTGCGTAA CGCCGTCTTC
CATTCCCTTA TTGACCTCCT GGTTGAAGAC GATTTCTATT CCCCCGCGCA CCGGATCATC
TACCGGACCT TCCAGGATCT CTACCGGCAA AACACCCCTA TCGATCTGTT GACCGTTTCC
GAACATCTGC GCAAGACAGA AGAGTTGGAC GCCGTCGGCG GACCCGTCTA TCTGACATCA
CTCACGGAAT CCGTGGCCAG TGCGGCTAAC GCCGAACACT ACGCGCAGAT CGTCAAGGAA
AAAGCGGTCC GGCGGGCCCT GATCCAGGTC GGCTCGGACA TGATCACCCG CTCTTTTGAA
AGCGGAGCGG AACTCGAAGG CCTTCTGGAC AACGCCCAGC AGGAAGTCTT TGCTGTGGCA
GAGGCCAAAT CCAGATCCAT TTTCCAGCCG ACACGGGAGT TGGTCAAAGA TGTCTTCGAG
CAGCTGGAAA AGCGGGTCGA ACGCCAGGAA CTGGTCACAG GGGTAGCTAC CGGCTACCAC
AAGTTCGACG AGCTGACCGC CGGCCTGCAA CCCACGGACT TGATTATTGT CGCCGGACGG
CCGGCCATGG GCAAAACCGC CTTTGCCCTG AATATGGGTA TGCGGTCTGC AGCCATGTTC
GAGGTCCCCA CGGCGGTCTT CTCCCTGGAG ATGTCCAAGC AGCAACTCAT GATGCGTATG
CTCTGTTCCT GGGGCAAGGT CGATCTGAAA AATCTCCGCT CGGGCTTTCT CGGTGACGAG
GATTGGGCCC GGCTGTACCA GAGTGCCGAC GATCTCGCTC AGGCCCCGAT GTACATCGAT
GACACCCCGG CGCTGGGGGT CATGGAGATG CGCGCCAGAT GCCGGCGACT CAAGGCCGAA
AAAGGTCTCG GCCTGGTCAT TGTCGACTAT CTCCAGCTTA TGCGCGCCAG CCGGAATATT
GATTCCCGGG AACAGGAAAT CTCTGATATT TCAAGAAATC TTAAGGCGCT GGCCAAGGAG
ATGGATGTCC CTGTCGTGGC CTTGGCTCAG CTCAACCGCA AAGTTGAAGA GCGGACCAAT
AAACGGCCTA TGATTTCCGA CCTGCGCGAA TCCGGGGCGA TTGAGCAAGA CGCCGACCTG
ATCGTTTTCC TCTACCGCGA GGACGCCTAC AATAAAAACG AGGACAACCC CAAAAAGGGC
ATTGCCGAAG TCATCATCGG TAAACAGCGC AACGGCCCCA CCGGGACGGT CGAACTCTCG
TTTCTTGACC GCTATACCGC GTTTGAAAAT CTGGCTCATG TGCCGGAGCC TTCGGAAGCT
TCCTGA
|
|---|
| Protein sequence | MTEKNNPKNN KKRNNSTGSS SSSAQGLDKV SKDLVRRLPP QNLEAEQAVL GGVFLRNAVF
HSLIDLLVED DFYSPAHRII YRTFQDLYRQ NTPIDLLTVS EHLRKTEELD AVGGPVYLTS
LTESVASAAN AEHYAQIVKE KAVRRALIQV GSDMITRSFE SGAELEGLLD NAQQEVFAVA
EAKSRSIFQP TRELVKDVFE QLEKRVERQE LVTGVATGYH KFDELTAGLQ PTDLIIVAGR
PAMGKTAFAL NMGMRSAAMF EVPTAVFSLE MSKQQLMMRM LCSWGKVDLK NLRSGFLGDE
DWARLYQSAD DLAQAPMYID DTPALGVMEM RARCRRLKAE KGLGLVIVDY LQLMRASRNI
DSREQEISDI SRNLKALAKE MDVPVVALAQ LNRKVEERTN KRPMISDLRE SGAIEQDADL
IVFLYREDAY NKNEDNPKKG IAEVIIGKQR NGPTGTVELS FLDRYTAFEN LAHVPEPSEA
S
|
|---|
| |