| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1092 |
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| Symbol | |
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| ID | 8418917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1283640 |
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| End bp | 1284323 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037664 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003197958 |
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| Protein GI | 258405216 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.972278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0193849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA ATTTCCAATT CGACTACAGC GTCATCTGGG AGTCCGTTCC CGCTTTGCTC
GACGGCGCAG AGTTGACGCT GATCATCACT ATTGTCGGTT GTTTCTTCGG ATTCATCCTC
GGGGTGACAG CGGGCCTTCT GCGGCTGTCC AAGGTCACAG CCATCAAAAA AGTCTCTGGA
ATTTATGTGG AGTCGGTCCG CGGGACCCCC CTTATGGTCC AGGTCATGTT TCTCTATTTC
GGTCTGCCCA TGGCTCTGGG GATGCGGATC CCCCCTCTCA CGGCCGGCAT TGTGGCCATC
GCTGTCAATT CAGGCGCCTA TATCGCTGAA ATCGTCCGCG GCGCTGTGCA GTCCATTGAG
CCGGGCCAGG TCGAAGCCGG CCGTTCCATC GGCCTGACCG CCCCGCAGAC CATGCGCTAT
ATTGTCTGGC CCCAGGCCTT CAAACGGATG ATTCCGCCCC TGGGCAACCA ATTTATCATC
AGTCTCAAAG ACACATCGCT TTTGGTGGTC ATCGGCGTGG GCGAATTGAC CCGCAGCGGC
CAGGAGATCA TTGCGGTCAA TTTCCGGGCC TTTGAAGTCT GGTTGACCGT GGCTGTGATG
TATCTGGCGA TCACCATGGG CATCTCCAAA TTCCTGCGGA TCATCGAATC GCGATGGTTC
ACGCAGCGGC TCCCGGAACA ATAG
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| Protein sequence | MATNFQFDYS VIWESVPALL DGAELTLIIT IVGCFFGFIL GVTAGLLRLS KVTAIKKVSG
IYVESVRGTP LMVQVMFLYF GLPMALGMRI PPLTAGIVAI AVNSGAYIAE IVRGAVQSIE
PGQVEAGRSI GLTAPQTMRY IVWPQAFKRM IPPLGNQFII SLKDTSLLVV IGVGELTRSG
QEIIAVNFRA FEVWLTVAVM YLAITMGISK FLRIIESRWF TQRLPEQ
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