| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1088 |
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| Symbol | |
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| ID | 8418913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1278977 |
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| End bp | 1281331 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037660 |
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| Product | Organic solvent tolerance protein |
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| Protein accession | YP_003197954 |
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| Protein GI | 258405212 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1452] Organic solvent tolerance protein OstA |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.567172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.030432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGT TCTCTTTGCA CCGCCTGTTG TGGATCTGTT TTCTCTGTTG CCTGCTGCAT
TTTCCACTCG AACCAGGTTT TGCCGCCCCG GTTTCCGGAC CTCAAACCTC TCCGGAGACT
CCCTGGGAGG TCGAAGCCGA TTCCGTCAGT GCGGACCAGG ATATCCAGCT CCTGGAAGCC
TGGGGCGACG TGACGCTGCA CAAGGGGGAA AACTATCTGA AAGCCGATTA CGTCCGGTAT
TACTGGAGTA CCCGATGGGT CTATCTGCGC GGCAATGTCC AGGGGAATTG GGGGGGCGAC
CATCTCCAGG CCGAAGAAGC CGAATTCGAC CTCCAATCCA AGGTCGGCTG GCTGAATAAC
GGCACCATTT TCGTTCAGGA CCCGCACATG TACTTCCAGG GCCGGGTGTT ACGCAAGACA
GGGACCAATA CCTACGCCTT CGAAGACGCC ACGGTCACGG CTTGCGATGG CCAAGTCCCG
GCATGGTCCC TTCGCTCCGC CAGCGGCGAA ATCACCGTCA ACGGGTACGC CCGCCTCTGG
CATCCCCGGC TGCAAATCAA AAACCGCCCT TTGCTCTACG CCCCCTATCT GACAATCCCC
GTCAAAACCA AGCGCCAAAG CGGCTTCCTC TGGCCCGATC TCACGGTGAG TTCCGAACAC
GGTGCCGGAT TCAATCTGCC GTATTACTGG GCCATCAACG AAGAACAGGA CGCCACCTTC
TATCTCAACC CCATGGATAA AACCGGGGTT CGCGCTGGTG TGGAGTACCG CCACACCCCG
AATCTGAGCA GCCAGGGGAT GTGGCTGGCG GATTGGCTCT ACGACCGCAG TACGGCCACG
GCCGCATCGG ACACAGAGTA CGAAAACGAC GGATTGTTGC GTCCCAACCA CAACCGGTAT
TGGTTGCGGG GCAAATACGA CGGCAAGACG TTTGGCAACC TGTTCGACCT CAAGGTCGAC
GTCGATTACC TCTCGGATCA GGATTATCTC AACGAATTCG ACCAGGGACC GCTGGGGTTT
GAGCGCAGCC GCCAGGAATT CCTGGACGTC TTCGGCCGTA CCATTGAAGA CGAGGACGAC
ATCACCCGGG AAAATCGCTT GTACCTTTCG CGCAACTGGC AGGATTCCGG GCTGCGCATG
CGCCTGGAAT ACACCCAGAA TCTCGCCTTT ACCAACGACA ACCGGGACTC TTCCCTCGAC
GACACCCTCC AGCGTTTGCC GCAGCTCGAG TACGATATCT ATCGGACCGC CCTTGGAACG
ACCCCCCTGG AATGGTCGGC GGAAAACGAA TTGACCTATT TCTGGCGCGA GTACGGCACG
ACCGGCAGCC GGCTCGATCT CCGGCCCCGC TTGAGTCTGC CCCTGGAATC CGCTTACGGT
TCGCTCATTC CGACTCTCGG TCTCCGGCAA ACCGTCTACG GTGTGGAGCG CTTTGAATCC
ACCACTGCCG CCCAAGAAAC CGATTCCGCC TGGATGAGCC GGACCTTGTG GGATTTTGAG
GCCACGGCCA ACACCGAATT TGGCCGGGTC TTCAACCTTG CCCCCCCACC AGCTGTGTCC
AACGCCACAG CCGGGGCGGC AAGTCGCTGG ACCAAGCTCA AACACGTTGT CCGGCCGGAA
CTCAGCTACG AGTATCAACC CTATGTCGAT CAGAGCGACT ACCCGGATTT CGACGACTTG
GATCGCATCG AGCCCCGCGA CGAGTTGACC TATTCCCTGA CCCAGGTTTT CACCGGGCGG
CGCGACAATC GGGTTCCTGT CGCCGCGGCG AACGGCACCA CCCAACGGTT CAAGCGTGTT
CCCCGTTACA CTGAACTGGC GCGCATCCGC CTGGAGCAAA GCTACGATTT TCGGGAAGCC
ACGCGCCAGG ACGACCGGGA GCAATACCCG CGCCGGCCGT TTTCCGATAT TCTGGTGGAC
ATCGAAACCG GGATCGCCCC ATGGCTGCGC CTGGACAATA AAACCTGGTT TTCGCCATAT
CTCGGGACCA TCACCGAGCA CGAACACCTT CTGCGCGGCA CGTGGCCCGA GGTGGGGAGT
TGCTTTTTCG GACTCGACTA CCACAAGCAG GTCAAAGACG ATTACGCCCG GCGCGACAAC
GATGCCCTGC GGACATTGAC CGCCGGAGTT ACGCTGACGG TCATTCCGAA ATGGTCCGCC
AGGGTGCGCT ATGAAAAAGA CCTCCTGCGG TCCGAACTCG TCGAACGACA ATTCGCCGTG
CAGTACCGCC ACCAATGCTG GCAGGCCGAG GCTGTTTTGA CTCAGACCGA CGAAGAGGAC
CGGGTCGAAG TCCGGGTCAC CCTGAACGAA TTGGGAACGG TGGGCCAATC ATTCCAGGCC
TCGGAGGAAC AGTGA
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| Protein sequence | MHLFSLHRLL WICFLCCLLH FPLEPGFAAP VSGPQTSPET PWEVEADSVS ADQDIQLLEA
WGDVTLHKGE NYLKADYVRY YWSTRWVYLR GNVQGNWGGD HLQAEEAEFD LQSKVGWLNN
GTIFVQDPHM YFQGRVLRKT GTNTYAFEDA TVTACDGQVP AWSLRSASGE ITVNGYARLW
HPRLQIKNRP LLYAPYLTIP VKTKRQSGFL WPDLTVSSEH GAGFNLPYYW AINEEQDATF
YLNPMDKTGV RAGVEYRHTP NLSSQGMWLA DWLYDRSTAT AASDTEYEND GLLRPNHNRY
WLRGKYDGKT FGNLFDLKVD VDYLSDQDYL NEFDQGPLGF ERSRQEFLDV FGRTIEDEDD
ITRENRLYLS RNWQDSGLRM RLEYTQNLAF TNDNRDSSLD DTLQRLPQLE YDIYRTALGT
TPLEWSAENE LTYFWREYGT TGSRLDLRPR LSLPLESAYG SLIPTLGLRQ TVYGVERFES
TTAAQETDSA WMSRTLWDFE ATANTEFGRV FNLAPPPAVS NATAGAASRW TKLKHVVRPE
LSYEYQPYVD QSDYPDFDDL DRIEPRDELT YSLTQVFTGR RDNRVPVAAA NGTTQRFKRV
PRYTELARIR LEQSYDFREA TRQDDREQYP RRPFSDILVD IETGIAPWLR LDNKTWFSPY
LGTITEHEHL LRGTWPEVGS CFFGLDYHKQ VKDDYARRDN DALRTLTAGV TLTVIPKWSA
RVRYEKDLLR SELVERQFAV QYRHQCWQAE AVLTQTDEED RVEVRVTLNE LGTVGQSFQA
SEEQ
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