| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1085 |
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| Symbol | hisH |
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| ID | 8418910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1275472 |
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| End bp | 1276113 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037657 |
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| Product | imidazole glycerol phosphate synthase subunit HisH |
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| Protein accession | YP_003197951 |
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| Protein GI | 258405209 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0118] Glutamine amidotransferase |
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| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.284908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0538289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGAGTA TCCTCGACTA TCGTGCCGGC AACCTGACCA GTGTCCGGCG CGCACTGGAC
TATCTTGGTA TACCGTGCAC CATCACCGCC GATCCGCAGG AAATCGAGTC CGGTTCCGGC
ATCATTTTCC CGGGCGTCGG AGCGGCCGGG ACCGCCATGC ACCATCTGCA GGCCAGCGGT
CTGGACCGGG TGTTGCACGA GCAAACCCAA AAAGGCAAGC CGCTTTTGGG AATTTGCCTC
GGCTGCCAGA TCGTTCTCGA TTACAGCCCC GAGAATGACA CCAGGACCCT GGGGCTCGTT
CCCGGACGGT GCGAACGGTT TGACGACCAG TGGACAGACG GCCAGGGATT GCCGATCAAT
ATCCCCCATA TGGGGTGGAA CAACATCCGC CTTCAAGCGC CGTGCCGGCT TTTTACCGAC
ATTGCCGATG AGGCGGCATT TTATTTCGTG CACAGCTATT ACCCGGCACC CGAAGCGGAA
TACGTGCTGG GAACCACGGA ATATGGACAA TCCTTTTGCA GTGTCCTGGG CCGCCCGGGG
TTGTGGGCCG TCCAGTTTCA TCCGGAAAAA AGCGGCCGCC CCGGTCTCAA ACTCTTGTCC
AACTTCTATC AGTATTGCCT GGAGGTGGCA GGTGCTCAAT AA
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| Protein sequence | MLSILDYRAG NLTSVRRALD YLGIPCTITA DPQEIESGSG IIFPGVGAAG TAMHHLQASG
LDRVLHEQTQ KGKPLLGICL GCQIVLDYSP ENDTRTLGLV PGRCERFDDQ WTDGQGLPIN
IPHMGWNNIR LQAPCRLFTD IADEAAFYFV HSYYPAPEAE YVLGTTEYGQ SFCSVLGRPG
LWAVQFHPEK SGRPGLKLLS NFYQYCLEVA GAQ
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