| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1074 |
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| Symbol | |
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| ID | 8418899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1265485 |
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| End bp | 1266393 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037646 |
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| Product | D-alanine/D-alanine ligase |
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| Protein accession | YP_003197940 |
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| Protein GI | 258405198 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.254672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.307992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCC TTTTGATAGC CGGGGGCTGG TCGAACGAGC GTGACGTCTC CATCAGCGGA
GGCAAAGCCA TCGCTGCGGC CCTGCGCGCC AACGGGCATG AAGTGCACTG GTTCGATCCC
GCACAGGAAT TCGCTGAGTT GCCCACAAAG GCACGCCAGA GCGATTTCGT GTTCATCAAT
CTCCACGGGG CGCCTGGTGA AGACGGCCTC ATCCAGGCCA TGCTGGATCG GCTCGGGTGC
CCGTATCAAG GATCCGGTCC GGCCGGTTCC CTGCTGGCCC TGGACAAGAC CGCAACCAAA
ACCTTATACG CCCAGGCCGG CCTTGCGACA CCGGCGTGGG AACTGGTGAC CTCCTGCCGA
GAAGAGAATT GGCAGCCTGC CCTGCGTTTT CCGCTCTTTA TCAAACCCAA CCAGGGCGGC
TCGAGTCTGG GCGTCCAACG CGTCTATTCC CAAAAGGAAT TGCATCCCCA ACTCTCCCAG
CAGCTCCAGT TCAGTTCGGC CGTGCTTTTG GAAGAGGCTG TGACCGGCAA AGAGGTCACC
TGTGCCGTGG TCGGCGAGCA GGCCTTGCCG TTGGTGCTCA TTGAGCCGGG GGACGAAGCC
GCCTTTTTCG ATTACCACAG CAAATATACT CCAGAAGCCG CCCGGGAAAT CTGCCCTGCC
CCCCTGTCTG AGACCCTCAC CGCCGCCATC CAGAAAGCGG CCCTGGAGGC CCATCGGATT
TTAGGGCTTA CCGGCTACAG CCGCACGGAT TTCATTCTCG CCAACGGGAC GGCCTTTGCG
CTGGAGACCA ACACCTTACC CGGCATGACC CCGACAAGCT TGCTCCCTCA GGCCGCCGCC
GCCCGCGGAC AAGATTTCAA CGGCTTATTG GAGGAACTCA TCCAGCTTGG CCTGAAACGG
TTCTCGTGA
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| Protein sequence | MRILLIAGGW SNERDVSISG GKAIAAALRA NGHEVHWFDP AQEFAELPTK ARQSDFVFIN
LHGAPGEDGL IQAMLDRLGC PYQGSGPAGS LLALDKTATK TLYAQAGLAT PAWELVTSCR
EENWQPALRF PLFIKPNQGG SSLGVQRVYS QKELHPQLSQ QLQFSSAVLL EEAVTGKEVT
CAVVGEQALP LVLIEPGDEA AFFDYHSKYT PEAAREICPA PLSETLTAAI QKAALEAHRI
LGLTGYSRTD FILANGTAFA LETNTLPGMT PTSLLPQAAA ARGQDFNGLL EELIQLGLKR
FS
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