| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1072 |
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| Symbol | |
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| ID | 8418897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1263283 |
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| End bp | 1264017 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037644 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_003197938 |
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| Protein GI | 258405196 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.678802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.218477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCCTC GTTGTATCGG AATCATCCCG GCCCGATACG CTTCCTCCCG CTTTCCGGGC
AAACCCCTGG CCCCTGTCCT GGGGCGCCCC ATGTTCTGGC ATGTCTATAC CCGGGCCTGC
CGTTGCCCTG AATTGTCCCA GGTCGTCCTG GCCACGGATG ACGAGCGTAT CGTGCACAGC
GCTCAGAACG AAGGAGTTCC CGTGGTCATG ACCCGTTCCG ACCACCCCAG CGGGTCTGAT
CGAGTCCTGG AGGCGGCCGA ACATTTGGGG CTTGACGAAG AAGACATCCT GGTGAACATC
CAGGGTGATG AACCGGCCTT GGACCCGTCC ATGCTTTCCG ATGTGGTCCG CCCTTTCACT
CAATCGGCGG TCCGTGTCGG AACCCTGGTC CGAGCTATAG CGGAAACAGA GGCCCGGGAT
CCCAACGTGG TCAAAGCCGT GACCGCCCCG GACGGGCGAG CGTTATACTT TTCCCGGGCA
CCGATTCCCT ATCCCCGGGA CAACGTGCCA GCGTATCTCG GTCATGTCGG CCTGTACGCC
TACCGTCTGC TCAGCCTGAA ACATTTCAGC TCCCTGGGGC CCAGCGCCCT GGAACAAAAA
GAACACCTGG AACAACTCCG TTTTCTGGAA GCCGGCATTC CGATCCATAC GGTACAGACA
GCCTGCCGCT GCCACGGCGT GGATTGCCCG GACGACATCA AGCGGGTGGA ACGTATCTTG
AAGGAGAGTC AATAA
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| Protein sequence | MPPRCIGIIP ARYASSRFPG KPLAPVLGRP MFWHVYTRAC RCPELSQVVL ATDDERIVHS
AQNEGVPVVM TRSDHPSGSD RVLEAAEHLG LDEEDILVNI QGDEPALDPS MLSDVVRPFT
QSAVRVGTLV RAIAETEARD PNVVKAVTAP DGRALYFSRA PIPYPRDNVP AYLGHVGLYA
YRLLSLKHFS SLGPSALEQK EHLEQLRFLE AGIPIHTVQT ACRCHGVDCP DDIKRVERIL
KESQ
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