| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1070 |
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| Symbol | |
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| ID | 8418895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1260230 |
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| End bp | 1262041 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037642 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_003197936 |
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| Protein GI | 258405194 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.229974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.255999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGC CTTACGGTGA AGGGTTAGCG CCCCACACCG ACCCCGAGTC ATGCGTTGAC
GGCCGTAAGG TCGGCGGCGA AGCGTTGACA GGGGCACGCA CGGGCCAGCC ATTGAGCTGC
GAAATAAAAT GGTCCGGGAC GCCGACGCTG TTAAGACAAG CGGAAGGCAA CACCAAGGAT
GGCGATATGC GCGAGCCGTC CGAGGGTCCC GCGCAGTCGA AGACCCTGTG CACGTGCGGA
AACTCCTTGC GCGGGAACCG GGAGGTCCCG GGAACTCCTT CTCCTGATGG TGGAGATGGA
CGGTCGGGGA AGGCTGGTGG CCAGAAGCCC GACAAACATG TTTCTGGGAA GTCGGATGGC
TGCATAGTAC CGGGAAAGCC GTTGAACAAG GGCATGGGAA GCCTGTCTGC GGAGGCGGTG
GAGGGAAGGC GGCCAACCAA GGGGAACGCG AGGCAGGCGG TCGCAGTCCG GACACAGAGC
CGGACAGCTG CGTCAATCGG ACTGCAACGC GTGCGAGATA TGGCTCGCAA GGATAAGGAT
GCACGGTTCA CTGCGCTTTT GCACCATGTG AGTATTGATA TGCTCGGCCA AAGTTTCCGC
GAACTGAAGC GAGAAGCAAC TCCGGGCGTT GATGGTCTCA CCTGTGCAGA ATATGAGGAT
GGCCTCCGCG AAAGGCTGAA AGAATTGCAT GCGAGGGTGC ATAGGGGTTC GTATCGAGCA
CAACCCTCAA AGCGAATCCA TATTCCGAAA CCCGATGGGC ACAAACGTCC AATTGGGATC
GCGGCGCTGG AAGACAAGAT CGTACAGCAC GCAGTTGGAA AGGTGCTTTC AGCTATCTAC
GAAGAGGATT TTCTCGGCTT TTCCTATGGG TTCCGGCCAA GGCGAGGGGC GCATGACGCC
CTGGACGCCC TAAATGTCGG ATTGACCCAC AGGAAGGTGA GCTGGGTGCT TGATGCGGAC
ATTCAGGGAT TCTTTGATAC CATCTCCCAT GAATGGATGA TCCGTTTCCT TGAGCACCGG
ATTGCCGATC CTCGGATACT TCGCTTGGTG CGCAAATGGC TCCGGGTTGG GGTATCGGAG
GACGGTGTAT GGTCCCAGAC AAGTATGGGC ACTCCCCAAG GAGCGGTGAT CTCGCCGATT
CTGGGGAACA TCTATCTCCA TTACGTCCTG GACCAATGGG TACACCACAG GCGAAGACAC
GCCCGTGGTG ACATAATCAT CGTGCGGTAT GCCGATGATT ATGTCTTGGG ATTCCAGTAC
CGCCACGAAG CAGAGCGCTT CCTCACTGAT CTCAAAGCAC GACTAGATCG TTTCGGCCTG
TCCCTGCATC CTGAAAAGAC CCGGCTTATC GAATTCGGTC GATTTGCTAC CGAGAGTCGG
CGCAAACGGG GACAGGGCAA ACCGGAGACA TTCGATTTTC TGGGATTTAC CCATATGTGT
GGGATAACCA GGATACGAAA GAGGTTCCTC GTGCGCCGCA AGACGGTGAA GAAACGGCTA
CGGGCGGCAC TGAAAAGGGT TAAGACGATT CTACGTAGCC GGATGCATGA TCCCATCAAC
GACGTAGGTG AGTGGCTGCA GCGCGTTTTG CTCGGCTATT ATAGATACCA CGCTGTTCCG
GGAAATCTTG ATGCTATGAG AGCCTTCCGT GATGATCTCG TCCGCTATTG GTATAAGGTG
CTACGGCGAC GGGGCCAGAA GCGGCGAATC AACTGGAGGG GCTACGGTCC GATCGTGAAA
AGGTGGATAT CCAGACCCAG AGTCATGCAT CCGTATCCAA ACGAGCGTTT CTACGCTAAA
TACCCGAGGT AG
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| Protein sequence | MKEPYGEGLA PHTDPESCVD GRKVGGEALT GARTGQPLSC EIKWSGTPTL LRQAEGNTKD
GDMREPSEGP AQSKTLCTCG NSLRGNREVP GTPSPDGGDG RSGKAGGQKP DKHVSGKSDG
CIVPGKPLNK GMGSLSAEAV EGRRPTKGNA RQAVAVRTQS RTAASIGLQR VRDMARKDKD
ARFTALLHHV SIDMLGQSFR ELKREATPGV DGLTCAEYED GLRERLKELH ARVHRGSYRA
QPSKRIHIPK PDGHKRPIGI AALEDKIVQH AVGKVLSAIY EEDFLGFSYG FRPRRGAHDA
LDALNVGLTH RKVSWVLDAD IQGFFDTISH EWMIRFLEHR IADPRILRLV RKWLRVGVSE
DGVWSQTSMG TPQGAVISPI LGNIYLHYVL DQWVHHRRRH ARGDIIIVRY ADDYVLGFQY
RHEAERFLTD LKARLDRFGL SLHPEKTRLI EFGRFATESR RKRGQGKPET FDFLGFTHMC
GITRIRKRFL VRRKTVKKRL RAALKRVKTI LRSRMHDPIN DVGEWLQRVL LGYYRYHAVP
GNLDAMRAFR DDLVRYWYKV LRRRGQKRRI NWRGYGPIVK RWISRPRVMH PYPNERFYAK
YPR
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