| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1069 |
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| Symbol | |
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| ID | 8418894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1259634 |
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| End bp | 1260188 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645037641 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
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| Protein accession | YP_003197935 |
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| Protein GI | 258405193 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
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| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.194882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.185929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCCTA TTCGATTGAC GACGCCCTTG AACAAAGAGG CGGTTCGAGA TCTCCGTGTC
GGTGATGTGG TCCTGCTGTC CGGGACCCTC TACACCGCCA GGGATGCAGC GCATAAGCGG
TTGTGTCAGG CGTTGTCCGA GGGCCAGCCT TCACCGTTCC CCTTGGAGGG CAGTGTCATC
TATTATGTCG GACCAACTCC TGCGCCGCCG GGGTTTCCCA TCGGCGCGGC CGGCCCGACA
ACCAGTTATC GTATGGACAG GTATACCCCG GAGTTGATCG GTCGCGGCGT GTTGGCAACG
ATTGGCAAGG GTCGCCGCAA TGAGGCGGTG CGTCAGGCGC TTCAGGACTG CGGGGCCGTC
TATTTCGGCG CCACCGGCGG GGCAGGGGCA TTGCTGGCCC AGCGCGTGCG CTCGGCCCGG
GTTATTGCCT ATGACGATCT CGGACCCGAA GCGGTGCGTG AACTGATTGT CGAGGATTTT
CCGCTGGTTG TCGTCAACGA CGCCCACGGT GGTGAACTCT ACGCGACGCC GCGCAGGCCA
GCCGTAACGG GGTGA
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| Protein sequence | MSPIRLTTPL NKEAVRDLRV GDVVLLSGTL YTARDAAHKR LCQALSEGQP SPFPLEGSVI
YYVGPTPAPP GFPIGAAGPT TSYRMDRYTP ELIGRGVLAT IGKGRRNEAV RQALQDCGAV
YFGATGGAGA LLAQRVRSAR VIAYDDLGPE AVRELIVEDF PLVVVNDAHG GELYATPRRP
AVTG
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