| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1068 |
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| Symbol | |
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| ID | 8418893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1258795 |
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| End bp | 1259637 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645037640 |
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| Product | fumarate hydratase |
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| Protein accession | YP_003197934 |
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| Protein GI | 258405192 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.149426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.287386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGAGA TCGCGGCTGA GGAAATCACG ACCCGGGTGG CGGAAATGGT CGTTCGGGCC
AATCGGCATC TGCCTCCGGA CGTCCTGGAG GCTTTGGAAG GGGGATTGGC TTTGGAGAGC
AGCCCGTCCG GGCGGGAAGT GTTGAGCCAA TTGCGTGAAA ACGCCCGAGT GGCTGCCGAA
ACCGGGCTTC CCCTGTGTCA GGATACTGGG GCGGCGGTCT TTTTTGTCTC CCTGGGCCAG
GAGTGTCGGG TAGTCGAAGG CAGTTTGCCG CGAGCGATCA ACGACGGGGT CGCCCAAGGG
TACGCCCGGG GCTATTTGCG GACTTCCATG TGCCATCCGC TGACCCGGCG CAATACCGGC
GACAACACGC CGGCCATTAT CCATACAGAA ATCGTTCCGG GCGATGGGTT GCATATCGCC
TTTATGGCCA AGGGGGGCGG CAGTGAGAAC ATGTCCCGTT GTACCATGCT CACGCCTGCG
GATGGCTGGG AAGGGATCAA ATCGTTTGTG CTCGACAGGG TGGCTGAGGC CGGGCCGAAT
CCCTGCCCGC CTATCATTGT CGGTGTCGGC GTCGGCGGGA CTTTTGACTG GGCGCCTGTG
CTGGCCAAGA AGGCGTTATT GCGCCCTCTG GACGCCCCGA ACCCTGATCC CGAGCTGGCC
GCCAGGGAGG AAGAGCTCTT AGAAGCGGTG AACGGACTCG GGGTCGGTCC CATGGGGCTG
GGGGGCAGCA TTACCGCCTT GGGGGTCCGC TTGGCCATGG CTCCCTGCCA TATCGCCAGT
CTTCCCCTGG CAGTCAATAT CCAATGCCAT TCGGCGCGGC ATGGGGAGGT TTCCTGGTCA
TGA
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| Protein sequence | MREIAAEEIT TRVAEMVVRA NRHLPPDVLE ALEGGLALES SPSGREVLSQ LRENARVAAE
TGLPLCQDTG AAVFFVSLGQ ECRVVEGSLP RAINDGVAQG YARGYLRTSM CHPLTRRNTG
DNTPAIIHTE IVPGDGLHIA FMAKGGGSEN MSRCTMLTPA DGWEGIKSFV LDRVAEAGPN
PCPPIIVGVG VGGTFDWAPV LAKKALLRPL DAPNPDPELA AREEELLEAV NGLGVGPMGL
GGSITALGVR LAMAPCHIAS LPLAVNIQCH SARHGEVSWS
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