| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1067 |
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| Symbol | frdB |
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| ID | 8418892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1258035 |
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| End bp | 1258814 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037639 |
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| Product | fumarate reductase iron-sulfur subunit |
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| Protein accession | YP_003197933 |
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| Protein GI | 258405191 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.446689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.284622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGCA TCCTTCAAAT CGATGTCTTT CGGCATAACC CCGCCGATCC TGGGTCTTCG
CCTCGGATGC AGACATTTTA CGTTGACGAG ACCGAGAGCA TGACCCTGTT TATCGCTTTG
AACCGTATCC GCGAGGAACA CGATCCGTCG TTGCAATTCG ATTTTTGCTG CCGCGCCGGT
GTCTGCGGCT CCTGCGGCAT GGTTATCAAC GGCCGGCCGG GGCTGGCCTG CCACACCAAA
ACCCAGGATT TGCCCAAGCA GATTGTTCTG CTGCCACTCC CCGTCTTCCA ACTCATCGGG
GATTTGTCGG TGGACACCGG GACGTGGTTT CGCGACATGC ACGAACGGGT AGAATCCTGG
ATCCATACTG ACAGCGAGTT TGATCCGGAA GCGCTGGAAG AGCCTATGGA TAATGCTGTT
GCTGAGACCG TCTTTGAATT GGACCGCTGC ATTGAATGCG GCTGCTGTAT CGCTGCCTGC
GCCACAGCGC GGATGCGGCC GGATTTTCTC GGCGCTGCCG GACTCAATCG CATCGCCCGC
TTTGTCATGG ACCCCCGGGA CGAGCGAACA GATGACGCCT TTTATGAATT GATTGGCACC
GATGAAGGAA TCTTTGGATG TATGGGCCTG CTGGCCTGCG ACGACGTCTG TCCCAAAGGG
TTGTCGCTAC AGACCCAATT GGCGTTTGTG CGCCGTAAGA TGGGCTGGAC GGGCTTGAAA
CAGCTCCTGC CGAATTGGAG AAGGGGCAAG CGGAGGGCGC ATGCGCGAGA TCGCGGCTGA
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| Protein sequence | MARILQIDVF RHNPADPGSS PRMQTFYVDE TESMTLFIAL NRIREEHDPS LQFDFCCRAG
VCGSCGMVIN GRPGLACHTK TQDLPKQIVL LPLPVFQLIG DLSVDTGTWF RDMHERVESW
IHTDSEFDPE ALEEPMDNAV AETVFELDRC IECGCCIAAC ATARMRPDFL GAAGLNRIAR
FVMDPRDERT DDAFYELIGT DEGIFGCMGL LACDDVCPKG LSLQTQLAFV RRKMGWTGLK
QLLPNWRRGK RRAHARDRG
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