| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1066 |
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| Symbol | |
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| ID | 8418891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1256069 |
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| End bp | 1257913 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037638 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_003197932 |
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| Protein GI | 258405190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.191298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.154596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA TTTATACCGA TCTGTTGAGC ATCGGCGCCG GTCTGGCCGG GGAGCGGGTG
GCCATTGAGG CTGCGCAGGC CGGGTTCACC ACTATCTGTC TGAGCCTTGT TCCCCCTCGC
CGTTCTCATT CCTCGGCCGC GCAGGGAGGG ATGCAGGCGG CCCTGGGCAA TTGCGCCATG
GGCGAGGGGG ACTGCCCGGA TATCCATTTC ACGGACACGG TCAAGGGTTC GGATTGGGGA
TGCGACCAGG AGGTCGCCCG GATGTTTGTC GAACACGCTC CAGTGGTCAT GCGCGAACTG
GCCCATTGGG GAGTGCCATG GAATCGGGTT GTGCCTGGTC CCTCGACCTA TTTCAAAGGC
GGCGAACAAT TCGAGAAAGT CGAACCAGAG GCAAGACAAG GACTGATCAC CGCCCGCAGT
TTCGGAGGCA CCGCGAAATG GCGGACCTGT TATACCAGCG ATGGGACCGG TCACGCCGTC
TTGTACACCA TGGACAACCG GGCGGTGCAA CTCGGAGTCG AGGTCCACGA CCGCACTGAG
GCCCTGGCGC TCATCCATGA TGGCGAACGG TGTATGGGAG CGGTCGTGCG CTGTCTGCGT
ACCGGGACAC TACGGATCTA TTTGGCTCGG GCCACTCTTG TCGCCTCCGG GGGCTACGGC
CGGATCTACA AACATTCCAC CAACGCTGTT ATTTGCGAGG GCGGCGGGCA GGCGCTCACC
CTGGACACGG GAGTGGTTCC CCTGGGAAAT ATGGAAGCCA TCCAGTTCCA CCCCACAGGC
ACCGTGCCCA CTGATATTCT GGTCACCGAA GGGTGTCGTG GTGACGGGGG AACCCTGCTG
GATGTCAACG GCCACCGCTT CATGCCCGAC TATGAACCGG AGAAGGCTGA GCTCGCCTCA
CGCGATGTTG TTTCCCGGCG CATGATCGAG CACATCCGTC GAGGGTATGG CGTACCATCG
AGTTACGGAG ACCATCTCTG GTTGGATATC CGTCACCTCG GTGAGACCCA TATCACCACC
AAACTCCGGG AAGTCTACGA TATCTGCCGC CATTTTTTGG GAGTGAACCC GGTTCACGCC
TGTATTCCGG TTCGGCCGAC CCAGCATTAC AGCATGGGGG GCATACGGAC GGACAAGACG
GGCCACGCCT ATGGACTGAA AGGGCTATTT GCTGCCGGAG AAGCCGCCTG CTGGGATTTG
CATGGCTTTA ACCGTCTCGG CGGCAATTCT CTGGCAGAAA CCGTTGTGGC CGGAAGTCTT
ATAGGCAGCG AAATCACCCG GTTTCTCCAG GGAGACCGGG GGCATCTCGT CCCACAGCTC
GGCCAGGAGT GTGCGAAACA GGTCCAGCAG CGTATTCGCA CTGTGCAAAC ACGGACCAAC
GGCGAAAACG TGTTCCAATT GCGCAACGCC ATGCAAAACG TGCTCATGGA AAAGGTGGGC
ATCTTTCGGG AGGAACCCGA ATTGCAGGCC GCCCTGGACC GTCTTCTTGA ACTCAGTGAG
CGCGCCGCTC AGATCGGATT GCGCAACCAT GGGGCGGGGG CTTGTCCGGA ATTGGCTCTG
GCCCTGAGGT TCCCCGGGAT GCTCCGGCTG GCCGTGTGTA CGACGTATGG CGCCTTGCAG
CGCAAGGAAA GCCGCGGCGC CCATGCCAGA GAAGATTATC CGGCCCGCAA TGACCGGGAG
TGGTGGAATC GGACCCTGGC CACCTGGACT GAAGAGCACG AGCTGCCCTC ACTGGAATAC
GAGCCCGCGA CTTCAGCTGT GGAGATCCCC CCTGGTGATC GCGGTTATGG GGGCGGGGAG
ATCATTTCCG GCGATGATGT CTGTACACCC CGTGATCCGG TCTGA
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| Protein sequence | METIYTDLLS IGAGLAGERV AIEAAQAGFT TICLSLVPPR RSHSSAAQGG MQAALGNCAM
GEGDCPDIHF TDTVKGSDWG CDQEVARMFV EHAPVVMREL AHWGVPWNRV VPGPSTYFKG
GEQFEKVEPE ARQGLITARS FGGTAKWRTC YTSDGTGHAV LYTMDNRAVQ LGVEVHDRTE
ALALIHDGER CMGAVVRCLR TGTLRIYLAR ATLVASGGYG RIYKHSTNAV ICEGGGQALT
LDTGVVPLGN MEAIQFHPTG TVPTDILVTE GCRGDGGTLL DVNGHRFMPD YEPEKAELAS
RDVVSRRMIE HIRRGYGVPS SYGDHLWLDI RHLGETHITT KLREVYDICR HFLGVNPVHA
CIPVRPTQHY SMGGIRTDKT GHAYGLKGLF AAGEAACWDL HGFNRLGGNS LAETVVAGSL
IGSEITRFLQ GDRGHLVPQL GQECAKQVQQ RIRTVQTRTN GENVFQLRNA MQNVLMEKVG
IFREEPELQA ALDRLLELSE RAAQIGLRNH GAGACPELAL ALRFPGMLRL AVCTTYGALQ
RKESRGAHAR EDYPARNDRE WWNRTLATWT EEHELPSLEY EPATSAVEIP PGDRGYGGGE
IISGDDVCTP RDPV
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