Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1065 |
Symbol | |
ID | 8418890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1255044 |
End bp | 1255691 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645037637 |
Product | Fumarate reductase respiratory complex |
Protein accession | YP_003197931 |
Protein GI | 258405189 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.494955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0281879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTCTC TCTCCAAACT TCCCCTGTCT TCCGGGCCCC GCTCGGCGGC TGTCACGTGG GATCTGCTCA GTTCTCTCAC CGGGGGAGCT CTGGCCGTGT ACATCGTGGC CCATATGGCC CTGGTGGGGA GTGTCCTTCT TGGCGTTGGC GTGTACGACA CCATGGCTGA GGCCCTTGAG TCTTCCGGGG TGGCGCAAAT CGACGGTCCT CTTGTCTTCG CGGTCTTTCT TGTGCATTTC CTGGCCGCCG GCCGGAAAGT CCCTTTGCGC TGGACGGAAC ATACGCTCGT GTGGCGGCAA ACCCGGATGC TGCGCCATAG CGAGACTTGG CTCTGGCTGG GCCAAGCCCT GACCGGGATG GTCCTTCTCT TGCTCGGGGG TATCCATATG TGGTCGGTAT TGACTGATCT GCCCATTACC GCCGCCAAGA GCAGTGAACG GATCGCCCAT CCGGCCTGGT TTGTGTTCTA TGTCCTTTTG ATTTGTGCCG TCACCGGCCA TGCCTTTGTC GGCCTGTACC GTTCAGGAAT CAAATGGGGC GCTGTCGTTC GCCGCAAACG TGCCACCGCC CGCCGTTTTT TCCTGGCCGG CGCTGGCGTA CTGGGATTGC TGGGCCTGAT AACCCTGGTC CGTTTTCTTT ATGTCTAG
|
Protein sequence | MASLSKLPLS SGPRSAAVTW DLLSSLTGGA LAVYIVAHMA LVGSVLLGVG VYDTMAEALE SSGVAQIDGP LVFAVFLVHF LAAGRKVPLR WTEHTLVWRQ TRMLRHSETW LWLGQALTGM VLLLLGGIHM WSVLTDLPIT AAKSSERIAH PAWFVFYVLL ICAVTGHAFV GLYRSGIKWG AVVRRKRATA RRFFLAGAGV LGLLGLITLV RFLYV
|
| |