| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1060 |
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| Symbol | |
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| ID | 8418885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1251246 |
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| End bp | 1251875 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037632 |
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| Product | Lysine exporter protein (LYSE/YGGA) |
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| Protein accession | YP_003197926 |
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| Protein GI | 258405184 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.741251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.078929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTCCTAG AAATCTTCGG TCTCGGACTT CTTGTGGGTA TGGCCCCAGG ACCCGATTTT
TTCCTGGTGC TCAAAAATGC CCTGCAGGGC GGACGGGCCA AAGGACGTGC CACAGCCCTG
GGTATCGGCT GCGGACTGCT TGTCCACGTG GCCTATTCTG TCTTTGGACT GGCATTGCTG
TTACAACGCT CTCCAGCCCT TTTTCAGACT GTTCAGACGG CCGGCGGCGC CTACCTGTTG
TGGTTGGCCT TTCAGACACT GCGCAGTTCT GTTGCTCCGG AAACGAAGGC CCCAGCGGGG
CTGCGCCGGC AGCAGCCCCG CGAAAGCGGA GCCGCCTCCA CGGTCCGCGC CGGATTTTGG
GAGGGCTTTT TGTGCAATCT GCTCAACCCG AAGGCAGCCC TGTTTTTTAT CAGTGTCTTC
TCCAACTATA TCACTGCCGG GGCCTCGTTT GGGGTCCATT GGATCTACGG ACTGGAAATT
GTCCTCGCCG TAACCCTGTG GTTCCTCTTT CTCGCCCGCG TTGCGGCCTC AGACCGGTTT
CGCGGCTTCT ACCTCTTTGC TCATCTCTGG GTCGATCGCG CCTTCGGGGT TCTCCTGGCG
TATCTTGGCC TCGGCCTGCT CTGGCCCTAA
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| Protein sequence | MFLEIFGLGL LVGMAPGPDF FLVLKNALQG GRAKGRATAL GIGCGLLVHV AYSVFGLALL
LQRSPALFQT VQTAGGAYLL WLAFQTLRSS VAPETKAPAG LRRQQPRESG AASTVRAGFW
EGFLCNLLNP KAALFFISVF SNYITAGASF GVHWIYGLEI VLAVTLWFLF LARVAASDRF
RGFYLFAHLW VDRAFGVLLA YLGLGLLWP
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