Gene Dret_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1059 
Symbol 
ID8418884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1250315 
End bp1250836 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content57% 
IMG OID645037631 
ProductDoxX family protein 
Protein accessionYP_003197925 
Protein GI258405183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0275169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCGC TCCCACGTTT TCTGGCCACA TCGGCCTGGG CGTATAGAAT CGTCCGGCTG 
GCTTTCGCGG TGATGTTTAT CATAGCCGGG GGACTCAAGC TCGCCGATCC CGCCGTTTTT
GCGACCACCA TCGATGCTTT TGGACTGATC CCATCTTTCC TGCTTCCTGT GGTGGCCATC
GGTTTGCCCC TTCTCGAAAT CCTCGCCGGT ATCGGTCTGC TTTTCGATTT CCGGGGCAGT
CTGACCACCC TGACTCTGCT CACAGTCGTT TTCATTCTGG TTTTGGCCTA CGGCATCCAT
CTTGGTCTGG ATATCGATTG CGGTTGCTAC GGACCGGGCG ATCCCGAGGC AGAGGCCTTC
GGCCATTTGC GCTCGTCTCT GTATCGCGAC CTGGGCATGC TGGTCATGGC TGGCTATCTC
TACATCTGGC GCCAGCTCAA CGGTATGCAG GCTATTTCCA GTCGCGTGCC GTTTGGGCAC
AGATTGATTT CCCTGCGTGA TTCCGGTTCA TCCTCACTCT GA
 
Protein sequence
MVPLPRFLAT SAWAYRIVRL AFAVMFIIAG GLKLADPAVF ATTIDAFGLI PSFLLPVVAI 
GLPLLEILAG IGLLFDFRGS LTTLTLLTVV FILVLAYGIH LGLDIDCGCY GPGDPEAEAF
GHLRSSLYRD LGMLVMAGYL YIWRQLNGMQ AISSRVPFGH RLISLRDSGS SSL