| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1046 |
|---|
| Symbol | |
|---|
| ID | 8418870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1236227 |
|---|
| End bp | 1237567 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645037617 |
|---|
| Product | adenosylmethionine-8-amino-7- oxononanoateaminotr ansferase |
|---|
| Protein accession | YP_003197912 |
|---|
| Protein GI | 258405170 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.201139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.341064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTTGG CAACCTCATG GACACAAAAC GGTGAGATCA CCATGGATAC CCCCCATATT
CTGCAATTCG ATCATGACCA TATCTGGCAC CCCTACACCT CGATGCGCGC CCCGTTACTG
GTGCGCGAGG TCGCTTCGGC CCGTGGTGTG CGGCTGAAGC TTTCTGACGG GACCGAACTT
ATTGACGGCA TGTCCTCCTG GTGGGCGGCC ATTCACGGCT ACAACAACCC GGTCCTCAAT
GACGCCCTGA CCGAGCAGGT CAAGGACATG GCCCATGTCA TGTTCGGCGG CCTGACCCAC
AAACCGGCGG TTCTCCTGGC CCGCAAGCTC GTCAGTCTGA CCCCGGAGGC GTTACAGAAA
GTGTTCTTTG CCGATTCCGG CTCAGTGGCT GTGGAAGTGG CCATGAAAAT GGCTTTCCAA
TACTGGCTCG GGCAGGGCCG CAGCGAGAAG ACAAAGCTCA TGACCATCCA ATCGGGGTAT
CACGGCGATA CCTTCGCCGC CATGGCCGTA TGCGATCCGA TCAACGGCAT GCATGAACAT
TTCGGCGATA TCCTGTCCCG TCACTATTTT GCCCCCGCCC CAACGACGCC GTTTGACGGG
CAATGGGATG ATGCCGACTT TGCCGCCTTC GAAGAAATGT TTTTGGCCCA CAAGGAGTCC
ATAGCCGCAG TCATCCTCGA ACCCGTGGTT CAGGGGGCCG GAGGGATGCG GTTCTATCAT
CCCGAATATC TCAGGCGGGT CAGGCAACTG TGCGATCAGA CCGGAATCCT GCTCATCGCC
GATGAAATCG CCACCGGATT CGGCCGGACC GGCAAGCTGT TCGGGTGCGA TCACGCCGGG
ATAACGCCGG ATATCATGTG TCTGGGCAAG GCCTTGACCG GCGGGTACAT GACGCTGGCC
GCGACGATGA CCACTGAGAA TGTGGCCGCC ACTATTTCAG AGACCTCGCC CGGAGTATTC
ATGCACGGGC CGACCTTCAT GGGCAACCCA CTGGCCTGCA GTGTCGCCGT GGCCAGTCTG
AGTCTGCTGC AATGTTCCGG GTGGCAGGAG AAGGTGGAGC GGATTGAAGC CCAATTGCAA
GAGGAACTCG AACCCTGCCG CGAACTGGCC GGTGTTGCCG ATGTCCGAGT CTTGGGCGCC
ATTGGTGTTG TCGAATGCCA CGAGCCCGTG GCTATGGAAT CCATTCAGCG GAGATTCGTG
GACAAGGGAG TCTGGATCCG GCCCTTTGGT CGTTTGGTGT ACCTCATGCC TCCTTACGTG
ATCAGCACTT CGGATTTGCG TTCTTTGACC CGGGCTGTTT ACGAAGCCCT GCTTGAGGAA
GAGCAGGAAG GGAGCAATTG A
|
|---|
| Protein sequence | MLLATSWTQN GEITMDTPHI LQFDHDHIWH PYTSMRAPLL VREVASARGV RLKLSDGTEL
IDGMSSWWAA IHGYNNPVLN DALTEQVKDM AHVMFGGLTH KPAVLLARKL VSLTPEALQK
VFFADSGSVA VEVAMKMAFQ YWLGQGRSEK TKLMTIQSGY HGDTFAAMAV CDPINGMHEH
FGDILSRHYF APAPTTPFDG QWDDADFAAF EEMFLAHKES IAAVILEPVV QGAGGMRFYH
PEYLRRVRQL CDQTGILLIA DEIATGFGRT GKLFGCDHAG ITPDIMCLGK ALTGGYMTLA
ATMTTENVAA TISETSPGVF MHGPTFMGNP LACSVAVASL SLLQCSGWQE KVERIEAQLQ
EELEPCRELA GVADVRVLGA IGVVECHEPV AMESIQRRFV DKGVWIRPFG RLVYLMPPYV
ISTSDLRSLT RAVYEALLEE EQEGSN
|
|---|
| |