| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1042 |
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| Symbol | |
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| ID | 8418865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1231971 |
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| End bp | 1232681 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037612 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_003197908 |
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| Protein GI | 258405166 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.406672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT CGCATCTTCA GAAAAGCCTG CTCGTCATTG TTTTGGTAGC AGTCATTCTC
GCCTTTTTCC TTTTCGATCT GGGACAATAC GCCAGTCTGG AGTATCTCAA GGCCTCCCAG
GCCCGGTTTT TAGAACTCTA CAAAAACCAC ACCCTGGCCG TGCTGGGGGG GTATATGGGA
GCTTATATCC TCATGGCCGC CCTCAGTCTT CCTGGAGCGG CCGTTTTCAC CCTTGCGGGC
GGGGCGTTGT TCGGGTTTTG GATTGGCCTT GTGGCGGCTT CCGTATCGAG TACCCTGGGG
GCTGTCCTGG CCTGCGCCGT TTCTCGCTAT CTGTTGCGCG ATATGGTCCA GACCAAATTC
GAGACCTCCT TGAAAAAAAT CAATCAGGGC ATAGAGCGTG AGGGGGCCTT TTACCTCTTT
ACCCTCCGCC TCATTCCTGT TTTCCCGTTT TTTGTCATCA ACCTCGCTCT GGGCGTGTCC
CACATGCGGC TTTGGACCTT TTATTGGGTC TCGCAAATTG GGATGCTTCC CGGAGCGGCG
GTCTACGTCA ACGCTGGCAA AGAACTCGGG CAACTCGAGA CCCTCTCCGG GATCCTCTCA
CCCGGGCTCA TCGGATCCTT CGCTCTGCTA GGGCTTTTTC CTCTGGTGGC CAAGAAGGGT
GTGGCTTTTC TCCGGGCCAG GCGCCAAAAC AGCTCGGTGA ACACTGAATA A
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| Protein sequence | MTRSHLQKSL LVIVLVAVIL AFFLFDLGQY ASLEYLKASQ ARFLELYKNH TLAVLGGYMG
AYILMAALSL PGAAVFTLAG GALFGFWIGL VAASVSSTLG AVLACAVSRY LLRDMVQTKF
ETSLKKINQG IEREGAFYLF TLRLIPVFPF FVINLALGVS HMRLWTFYWV SQIGMLPGAA
VYVNAGKELG QLETLSGILS PGLIGSFALL GLFPLVAKKG VAFLRARRQN SSVNTE
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