Gene Dret_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1040 
Symbol 
ID8418863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1229891 
End bp1230361 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content57% 
IMG OID645037610 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003197906 
Protein GI258405164 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.343203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.534786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAACG AAGAAATAAA AGAAATTGTC AAACAAATCA GACAGCTTGT TCGAGCAGTG 
TATCGCGACT CCCTGACCAT GGCCCGCGAA TACGGCTTGA CGCCGCCCCA ATGCGCCCTG
CTCAGGACCA TCTATCTCCA GGGCCCCCTT TCTTCGGCCG CTTTAAGCCG AAATCTTTTC
GTCACGCCTT CCAATATCAC CGGCATCGTC GATCGGCTGG TCAAAAAGGA CATGGTTGTC
CGCGAGCGCC AACTCAAGGA CCGCCGGGTC ACTCTCATCA GCCTGACCGC GACCGGGCAC
ACTCTGGCGG CTTCGCTGCC CGACAATATC GAAACCAAGC TTGTAGAGGG TCTGTCTGAA
CTCCAGGACA GCCATATCCA GGACCTTTCA CGGTCGCTTG CAGAAATTCT CGCCCTTATC
GATGCCTCCC ACGTCACCGC CGCCCCCCTG GAACTCCCTC GCCGGCACTA G
 
Protein sequence
MYNEEIKEIV KQIRQLVRAV YRDSLTMARE YGLTPPQCAL LRTIYLQGPL SSAALSRNLF 
VTPSNITGIV DRLVKKDMVV RERQLKDRRV TLISLTATGH TLAASLPDNI ETKLVEGLSE
LQDSHIQDLS RSLAEILALI DASHVTAAPL ELPRRH