| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1036 |
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| Symbol | |
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| ID | 8418859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1220995 |
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| End bp | 1224651 |
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| Gene Length | 3657 bp |
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| Protein Length | 1218 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037606 |
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| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
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| Protein accession | YP_003197902 |
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| Protein GI | 258405160 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.483594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.696073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC AAATGAAAAC GATGGATGGG AACACCGCCA CCACATATGT GGCTTACGCC
CTCAGCGATG CGGCGGCCAT CTATCCGATC ACACCGTCAT CAACCATGGG TGAAGTGGCT
GACGACTGGG CGGCCCAAGG CAGAAAAAAT ATTTTTGATC AGGAAGTCAA CGTTAAGCAG
CTCCAGTCCG AAGCCGGCGC CGCCGGTGCC GTTCACGGCT GCCTGGCCGC CGGGGCGCTG
ACGACCACGT TTACCGCCTC GCAGGGCCTG TTGCTCATGA TCCCGAACAT GTACAAGATT
TCCGGTGAAT TGCTGCCGGG TGTCTTCCAT GTCTCGGCCC GTGCTGTTGC TGGCCACGCC
CTGTCCATTT TCGGTGACCA CCAGGACGTC ATGGCCACCC GTCAGACAGG ATTTGGCCTG
CTGGCCTCGG CCTCGGTCCA GGAAGCCCAC GACATGGCGC TTGTCGCCCA TCTTTCGGCC
ATCGATTCCA GCCTGCCGTT TCTGCACTTC TTCGACGGGT TCCGGACCTC CCACGAAATC
CAGAAGATCG AAGTTCTCGG ATACGATGAA ATGGCCAAAC TCGTGAGCTA CGAGGCCATT
GAGAACTTCC GTTCCCGGGC CATGAACCCC GAGCATCCGG ACATCCGGGG CACCGCCCAG
AACCCGGACA TCTACTTCCA GGGCCGCGAG GCTGCCAACG TCTTCTATAA TGATCTGCCG
CAAATCGTGA TGCAGAACCT GAAGAAGGTC AGCCAGGCTG TCGGACGGGA ATACAACCTT
TTCGATTACG TCGGCCATCC CGAAGCCGAT CGGGTTATCG TGGCCATGGG CTCCGGTTGC
GAAACCATTG AGGAAGTGGT CAACCACATG GTCAAAGACG GCCATCGGGT TGGTCTGGTC
AAGATCCGCC TGTACCGCCC CTTCGTCAAA GAGGCGTTCC TGCAGGCCCT GCCGGCCACC
GCAGACCGCA TCGCTGTTTT GGATCGGACC AAAGAGCCCG GTTCCGTTGG CGAGCCCCTG
TACGAAGATA TCTGCTCGGC ATTCACCGAG TGGAAAGAAA TCCCGCGCAT TGTCGGCGGC
CGCTATGGTC TGGGTTCCAA AGAGTTCAAC CCGGCCATGG TCAAGGCAGT TTTCGACAAT
CTCAATGCCA CCGCCCCGAA AAATCACTTC ACCGTGGGCA TTGAAGACGA TGTCACCTTC
ACTTCCCTGG ACGTCAAAGA AAGCCTGGAC ACCACCCCTG AAGGCACGGT GCAGTGCAAA
TTCTGGGGCC TTGGATCCGA CGGCACTGTC GGCGCCAACA AACAGGCCAT CAAGATCATC
GGTGACAACA CCGATCTCTT CGCCCAGGGA TACTTCTCCT ACGACTCCAA AAAATCCGGC
GGCATCACCG TCTCTCACCT GCGCTTCGGA AAAAATCCGA TCCAGTCGAC CTACCTGGTG
ACCGACGCCG ACTACGTGGC CTGCCACAAG GACAGCTACG TCCGCCAGTA CGATATCCTG
GAAGGAATCA AGGACGGCGG TACCTTTGTG CTCAACTCCC ACTGGTCCTT GGAAGACCTG
GAGAAGGAAC TTCCGGCGTC CATGCGGCGG ACCATCGCCC GCAAGAAGCT CAAGTTCTAC
AATATCGACG CGGTGAAAAT CGCCTCTGAA GTCGGTCTCG GCGGCCGGAT CAACATGATC
ATGCAGACCG CGTTCTTCAA GCTCGCCAAT GTCATTCCTT TTGAGGAAGC GGTGGCCTTG
CTCAAGGACT CCATCAAAAA GACCTACGGC AATAAAGGCG AAAAGATCGT CAACATGAAC
ATCGCCGCCG TGGACAACGC CATCGCTGGC CTTGAAGAGG TCGCCTACCC CGAAAGCTGG
AAGGACGCTC AGGACGAAGC CCGCCCCGAA TCCGGCGAGC CCGATTTCAT CAAGAATGTG
GCCCGTCCGA TCCTGAACCA GAAGGGCGAC GACCTGCCGG TTTCCGCTTT CGAACCCGAC
GGTACCTTCC CCGTGGCGAC TGCGCAGTAC GAAAAACGCG GCGTGGCCAT CAACGTCCCG
GAATGGATCG CTGACAACTG CATCCAGTGC AACCAATGCG CCTTTGTCTG CCCCCACTCG
GCCATCCTTC CCGTTCTTTT GACCGACGAG GAAAAAGAGG CCGCCCCGGA ATCGTTCAAC
ACGATCGACG CCAAAGGCAA GGACGTCAAA GGTCTGCATT TCCGCATCCA GGTCAACACC
ATGGACTGCC TTGGCTGCGG CAACTGCGCC GACATCTGCC CGGCCAAGGA AAGCGCTCTG
GTCATGAAGC CTCTGGACAC CCAGACCGAG ATCGAAGTTC CCAACTACAA CTACTCCCAG
AAGGTCTCCA GCAAGGGCCA CCTGTTCAAG CGCGAATCCC TCAAGGGCAG CCAGTACTAC
AAGCCGCTCA TGGAATTCTC CGGCGCCTGT GCCGGCTGCG GCGAGACCCC TTACGTCAAG
GTGCTGACCC AACTCTTCGG CGAACGGATG GTCATCGCCA ACGCCACCGG CTGCTCCTCC
ATCTGGGGCG CCTCCGCGCC GACGACCCCT TACACCGTCA ATGAGGACGG CCACGGTCCG
GCCTGGGGCA ACTCCCTCTT CGAGGACGCC GCCGAGTTCG GGTACGGGTT CAGCATGGCC
TACAATCAGC GCCGGGACAA ACTTGCGGCT CTGGCCAAGC AAGCTGTTCA GCAGGATATC
CCGGAGGAAC TGAAGACCGC TTTGCAGAAC TGGGTGGACA ACATTGATAA CGGCGATCTC
TCCAAGCAGT ACGGCCAAGA GGTCAAAGAC CTGCTGGAGA TCGCTCCCGA GAGCAAGGTC
CTGGATGAGA TCTGGGCCAA TAGCGACATG CTGACCAAGA AGTCCGTCTG GGTCTTCGGC
GGCGACGGCT GGGCCTACGA CATCGGATAC GGCGGCGTGG ACCACGTCCT GGCATCCGGC
GAGGACATCA ATATCCTGGT CATGGACACC GAGGTTTACT CCAACACCGG CGGGCAGTCC
TCCAAGGCCA CACCCACCGG CTCCATCGCC AAGTTCGCTG CCTCCGGGAA AAAGACCTCC
AAAAAGGACC TGGGTCGCAT GGCCATGACC TACGGCTACG TTTACGTGGC CTCGGTCTCC
ATGGGCGCGA ACAAGCAGCA AATGCTCAAG GCCTTCGCTG AAGCTGAGAG CTACCCTGGT
CCCTCGCTGA TCATCTGCTA CGCTCCGTGC ATCAACCAGG GCCTGCTCAA GGGTATGGGC
AAGGCCCAGG AAGAGGAAAA ACTGGCTGTG CAGTCCGGCT ACTGGCCGCT GTACCGCTTT
GACCCCCGCC GGGCCGATGA AGGACAGAAC CCGCTGGTTC TGGAATCCAA AGCCCCCGAC
GGCACCTTGC AAGAATTCCT CAGCGGTGAG CGTCGCTACG CCATGCTGGA AAAGATGTTC
CCCGAGGAAT CCAAGAAATT GCGCTGCCAG ATCGAAAAAG AATACCAGGA ACGCTACGCT
GTGCTGCAGT ACCTGGCCCA GGCCACACCT GAACAGATCG GCTGTGCCGT CCCTGCAACC
GGCGTCAGCA GCTCGGGTCA GTCCGCTGAC TCTGACGCCT GCGAAATCGC TGACACCCCG
GAACACGCCC GCCCCGGATC AGGCGAAGCC TGTGACGACG GCCGTTCCGG CAAATAG
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| Protein sequence | MTKQMKTMDG NTATTYVAYA LSDAAAIYPI TPSSTMGEVA DDWAAQGRKN IFDQEVNVKQ
LQSEAGAAGA VHGCLAAGAL TTTFTASQGL LLMIPNMYKI SGELLPGVFH VSARAVAGHA
LSIFGDHQDV MATRQTGFGL LASASVQEAH DMALVAHLSA IDSSLPFLHF FDGFRTSHEI
QKIEVLGYDE MAKLVSYEAI ENFRSRAMNP EHPDIRGTAQ NPDIYFQGRE AANVFYNDLP
QIVMQNLKKV SQAVGREYNL FDYVGHPEAD RVIVAMGSGC ETIEEVVNHM VKDGHRVGLV
KIRLYRPFVK EAFLQALPAT ADRIAVLDRT KEPGSVGEPL YEDICSAFTE WKEIPRIVGG
RYGLGSKEFN PAMVKAVFDN LNATAPKNHF TVGIEDDVTF TSLDVKESLD TTPEGTVQCK
FWGLGSDGTV GANKQAIKII GDNTDLFAQG YFSYDSKKSG GITVSHLRFG KNPIQSTYLV
TDADYVACHK DSYVRQYDIL EGIKDGGTFV LNSHWSLEDL EKELPASMRR TIARKKLKFY
NIDAVKIASE VGLGGRINMI MQTAFFKLAN VIPFEEAVAL LKDSIKKTYG NKGEKIVNMN
IAAVDNAIAG LEEVAYPESW KDAQDEARPE SGEPDFIKNV ARPILNQKGD DLPVSAFEPD
GTFPVATAQY EKRGVAINVP EWIADNCIQC NQCAFVCPHS AILPVLLTDE EKEAAPESFN
TIDAKGKDVK GLHFRIQVNT MDCLGCGNCA DICPAKESAL VMKPLDTQTE IEVPNYNYSQ
KVSSKGHLFK RESLKGSQYY KPLMEFSGAC AGCGETPYVK VLTQLFGERM VIANATGCSS
IWGASAPTTP YTVNEDGHGP AWGNSLFEDA AEFGYGFSMA YNQRRDKLAA LAKQAVQQDI
PEELKTALQN WVDNIDNGDL SKQYGQEVKD LLEIAPESKV LDEIWANSDM LTKKSVWVFG
GDGWAYDIGY GGVDHVLASG EDINILVMDT EVYSNTGGQS SKATPTGSIA KFAASGKKTS
KKDLGRMAMT YGYVYVASVS MGANKQQMLK AFAEAESYPG PSLIICYAPC INQGLLKGMG
KAQEEEKLAV QSGYWPLYRF DPRRADEGQN PLVLESKAPD GTLQEFLSGE RRYAMLEKMF
PEESKKLRCQ IEKEYQERYA VLQYLAQATP EQIGCAVPAT GVSSSGQSAD SDACEIADTP
EHARPGSGEA CDDGRSGK
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