| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1030 |
|---|
| Symbol | |
|---|
| ID | 8418853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1211624 |
|---|
| End bp | 1212883 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645037600 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003197896 |
|---|
| Protein GI | 258405154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.417426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTTG AATGGGATTG GGAACCTGGT GACAAGCTCG TACACGACAC CAGCACATGC
ACTGCGGACA GCGAGTGGAT CGAAGAGCCG ATCGTCAGCC CTGACGGGCA ACGGGTGGCA
TCAGTGGTCA AACTCGGGGA ATTTGAATTT GGGCTGAGCG TCAACGGAAC GCCCTGGGAA
ACGACGTTTG ACCGTATCTG GTATCCACGT TTCACCCCAG ATGGACGGCT TACCGCCATC
ACCCAGCAGG AAGAAGAATG GACGATCAGT ATCGAGGGAA CCCCTTGGGA AGAGACTTAC
GGGTTCGTCT GGCAGACCAT GTTCAGTGAG GATGGGGCGC ATGTCGCGGC CGCTGTCCAG
CAGGACATGC AATTTTACGG GGTAACCGTA GACGGCAAAG TCTGGGAGAA CATGTTCGAA
GCGGCCACCG ACTTCGTTTT CAGCCCCAAG GGCAATGCCA GCGCTGCCGT GGCCCAGGTC
CAAAGCTTCG GTCAGGCCGA CATCTTCACC TTCCAAAACG GCTGCTTCAC TGTGGCTGTT
AACGGCGAGC CCTGGGACTC TGTCTTCGTC AATGCCTGGA CGCCGACGTT CGACGCCACC
GGCACGCATG TCGCCGCTCA AGTCCGCCAC ACGCTGTACG ATTACACTAT TGCCGTAGAT
GGCAAACCGT GGGCTCAGAC CTTCAATGCA GTCTGGGAGC CCACATTCCA TCCCCAGACC
GGGGCTGTTC TCGCCCCTGT CCGTCACGGG GGTGCCTGGG GATTGGCTCA GGATGGACAA
TTCATCTGGC AGCCGCGCTA CGCCCAGCTC TGGAAACTGC AGTTCAGTCC GGACGGCCAA
CGGGTCGCGG CCGTGTGCGC CCCGCGTTAC GGCCATTGGA CCGTCACCGT GGACGATACA
CCCTGGCACA CTGAGCTCAA TCAATTCATT ACCGATTTGC GCTGGTCCCC TGACAGTCAA
CGCATCGGGG TCATCGGCAA AGAAGGTAAT CGCTGGAAAA TCCTGGTCGA CGACACTGAA
TGGCCGGGCG ATTATGATAT GACCTGGGCG CCGGTCTTTA GTCCTGATTC CCAGAATGTC
GCGGCCAAGG TCGAACAAAA CGGGAAATAC ACCGTACTCC TGAATGGCAA AGCGTATAAG
GAAGAATTCG ACGGCTTGTG GGATCCTGTG TTCAGCCCTG ACGGCACCCA CCTTTTACTG
CGGGCCATGC GGGGCACGAA CTACCACCGT ATAGTGGTCC CCATTTCGGA ATTCGCCTAA
|
|---|
| Protein sequence | MVLEWDWEPG DKLVHDTSTC TADSEWIEEP IVSPDGQRVA SVVKLGEFEF GLSVNGTPWE
TTFDRIWYPR FTPDGRLTAI TQQEEEWTIS IEGTPWEETY GFVWQTMFSE DGAHVAAAVQ
QDMQFYGVTV DGKVWENMFE AATDFVFSPK GNASAAVAQV QSFGQADIFT FQNGCFTVAV
NGEPWDSVFV NAWTPTFDAT GTHVAAQVRH TLYDYTIAVD GKPWAQTFNA VWEPTFHPQT
GAVLAPVRHG GAWGLAQDGQ FIWQPRYAQL WKLQFSPDGQ RVAAVCAPRY GHWTVTVDDT
PWHTELNQFI TDLRWSPDSQ RIGVIGKEGN RWKILVDDTE WPGDYDMTWA PVFSPDSQNV
AAKVEQNGKY TVLLNGKAYK EEFDGLWDPV FSPDGTHLLL RAMRGTNYHR IVVPISEFA
|
|---|
| |