| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1023 |
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| Symbol | |
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| ID | 8418846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1205787 |
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| End bp | 1206434 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645037593 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003197889 |
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| Protein GI | 258405147 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.486582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTGCGC ACACGAGATC AGATTGCAGC ATACCGTATA TATTCTTTGA TTTCGGTGGA
GTCCTTGCTG AAGAAGGTTT TTATCAAGGA CTTCATGTGA TCGCTCGGGA AAACGGCCTT
GATCCTGCAT GGTTTGTGCC GCTGGCCGTG GAAACCATCC TCAAGACAGG GTATGTCCTG
GGGAAGGGAA CAGAATCGGA GTACTGGAGT GCCTTGCGGC AGCAGACCGG GGTGGACTGG
TCTGATGATC AGTTGCGAGA GACCATTCTC AACCATTTTG TCCCTCGTCC GGCAATGCTG
CAATTATTGA GCGTTCTCGC CGAGGACCCG GTCCATCTTG GGTTGTTGAG CGACCAAACC
GATTGGCTGG ATGAACTCGA CGCCAGATAC GGCCTCTATA CTTTTTTTGA TTCTGTCAAC
AATTCGTATG TCACCGGTTT GCATAAAGGT CAGCCGGCAT GTTTTGAGCT CGCGCTGAAA
ACGGTTCGGG CCGAAGCGAA GGACTGTTTG TTTATCGACG ACAACCCGAA CAATATCCGC
GTTGCCCGTG AAGTGGGGCT GGAGACGATC CTGTTTCGCG ATCTGTCGGG CTTTGCCGCG
GATTTTCGTC GGTATTGCCC CCAGGCGGTC CAATCCGTTT TTTCCTAA
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| Protein sequence | MTAHTRSDCS IPYIFFDFGG VLAEEGFYQG LHVIARENGL DPAWFVPLAV ETILKTGYVL
GKGTESEYWS ALRQQTGVDW SDDQLRETIL NHFVPRPAML QLLSVLAEDP VHLGLLSDQT
DWLDELDARY GLYTFFDSVN NSYVTGLHKG QPACFELALK TVRAEAKDCL FIDDNPNNIR
VAREVGLETI LFRDLSGFAA DFRRYCPQAV QSVFS
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