Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1011 |
Symbol | |
ID | 8418834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1188766 |
End bp | 1190676 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645037581 |
Product | ABC transporter related |
Protein accession | YP_003197877 |
Protein GI | 258405135 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.954717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0514719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTAT TGACTGCGCA AGATCTCCGA TTGACCCACA TCGGTCCGCC TCTTCTTGAT GGAATCGATT TGCAGATCCA CCCTGGCGAC AGGATCTGTC TTCTGGGACG CAATGGAGCG GGCAAATCCA CATTGATGAG CATCCTGGCC GGGATTCGAT CTGCGGATGC CGGGACCGTG CACCGGGACA CCGGTGTCGA AGTGGCCCAT CTGCCCCAGG AACTGCCGGA TTCGGAAATG GACAAGTCGG TCTATGCCGT GGTGGCTTCC GGACTGGGGG AGCAAGGCGA AAGTCTTGTC GCCTATCAGC GGCAACTCGA TCTGGCGGAG TTGCAAGGGC ATCCGGATAT CCGTGCGCTG GAGGCAGCCC AACAGGAAGT GGAGCGGCAT GACGGCTGGG ACGCGGACCG GCGCATCCGC GAGATGCTCA CCCGGCTCAA GTTGGACGGT TCGGCTCACT CCCGCCATTT GTCGGGCGGT GTCCAGCGCA GGGTTCTTCT GGCCCGGACA CTGGTCGGGA CACCGGATAT CCTGCTTTTG GACGAGCCGA CGAACCATCT GGACATGCAA TCCATCCAAT GGCTGGAGGA ATATATCCTG CGCCATGTGC CGACGCTTTT GTTCGTCACC CACGATCGAG CCTTTCTGCG CCGCGTGGCC AACGGAATCA TCGAACTCGA CCGCGGGATG TTGACGCGCT GGCAATGCGA TTATCCGACC TATTGCGAAC GCAAGGAAGC GGCCCTGGCG GCCGAAGAAG AGCAGTGGCG GCGCCAGAAC CAGCGGCTTG CCGAGGAGGA AGCCTGGCTC CGCAAAGGAC TCAAGGCCAG GCGCAAGCGG AATATGGGCC GTGTGCGGGC CCTGGAACGG TTGCGCCAGG AATGTCGGCA ACGGCGGCAG CGTGAAGGCA CCGCCCGATT GGCTATTCAG GAGGCGCGCC AGAGCGGCCG GGTCGTTGTT GAGGCCGAAG CAGTGACCCT GGGCTACACC GACGCCCCGG TAGTCCGGGA TTTTTCACTT GTTATCCAGC GGGGGGACAA GGTCGGGATT GTTGGTCCAA ACGGGTGTGG GAAAACGACG TTGCTCAAAG GGCTCTTTGG GGAATTGGCT CCGGCTCAGG GGCAGGTGCG ACTGGGAACC AACCTGGAGG TCGCGTATTC GGATCAGATG CGCGACGCAT TGCCGCCGGA AACCCCGGCC CGAGACATTG TGGCTGAAGG CAATGATTTT CTTGATGTCG GTGCCAAGCG CATGCATGTA GTTTCGTATC TGCGCGATTT TCTCTTTACC CCTGAACGGG CTCAGATACC GTGCAAGCTC TTATCCGGCG GGGAGCGCAA CCGGCTGCTG CTGGCGACGT TGTTTGCCCG GCCGGCCAAT GTCCTGGTTT TAGACGAACC TACGAACGAT CTCGACAGCG AGACGTTGGA ACTTTTGGAA TCGAAACTGG TGGAATTCGA GGGCACTGTT TTGCTCGTCA GTCACGACCG GCAATTCATC GAAAATGTGG TCACCTCCAC CCTGGTGTTT GAGGCCGACG GTCAAGTGGT TGAACACGCT GGCGCAGTGC CCCGATGGGA GGGGCTCTGG GCCGGTGCGG CGGAGCCGGA GCCGCGATCT GAGAAATCCC CCGCCACTTC GTCATCCAAG CCAAAGCGGG AGCGGCCGCG GAAGTTGGGG TTCAAGGAGG CCCGGGAACT GGAAAAGCTC CCGGAGGCTA TTGAGGCCAA GGAAGGCGAG TTGGACGCAT TGCACTCCTT CATGGCCGCC GAAGATTTTT ACCGGCAGGA TGAGGCGCGC ATCAAGGAAG CCGTGGAGCG ATTGGAACCG TTACAAGAGG AAATCGCCTC TTTGTACCAG CGGTGGGAAG AACTTGAGGC CATCCGGCTT CATTCCGAGC ACAAGGGGTA A
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Protein sequence | MALLTAQDLR LTHIGPPLLD GIDLQIHPGD RICLLGRNGA GKSTLMSILA GIRSADAGTV HRDTGVEVAH LPQELPDSEM DKSVYAVVAS GLGEQGESLV AYQRQLDLAE LQGHPDIRAL EAAQQEVERH DGWDADRRIR EMLTRLKLDG SAHSRHLSGG VQRRVLLART LVGTPDILLL DEPTNHLDMQ SIQWLEEYIL RHVPTLLFVT HDRAFLRRVA NGIIELDRGM LTRWQCDYPT YCERKEAALA AEEEQWRRQN QRLAEEEAWL RKGLKARRKR NMGRVRALER LRQECRQRRQ REGTARLAIQ EARQSGRVVV EAEAVTLGYT DAPVVRDFSL VIQRGDKVGI VGPNGCGKTT LLKGLFGELA PAQGQVRLGT NLEVAYSDQM RDALPPETPA RDIVAEGNDF LDVGAKRMHV VSYLRDFLFT PERAQIPCKL LSGGERNRLL LATLFARPAN VLVLDEPTND LDSETLELLE SKLVEFEGTV LLVSHDRQFI ENVVTSTLVF EADGQVVEHA GAVPRWEGLW AGAAEPEPRS EKSPATSSSK PKRERPRKLG FKEARELEKL PEAIEAKEGE LDALHSFMAA EDFYRQDEAR IKEAVERLEP LQEEIASLYQ RWEELEAIRL HSEHKG
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