| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1003 |
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| Symbol | |
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| ID | 8418825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1177839 |
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| End bp | 1178732 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037572 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003197869 |
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| Protein GI | 258405127 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0215255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG CCGTTTCGGC TTCCACGGGA AAGGCCTACA CCATGCGCCG AGTCTGCAGG
GTATGGAGAA TACCCCGCTC TACTGTCTAT CATAGGTTGC AGCAAAGCAA GCAGTGCTCA
TCACGTCCCC GCGGCCCCAA GGCTTTTTAT TCCGATGCTG AGCTAGTTGC CCATATTAAG
GATCTTCTCG AACAATCCCC TTTTCACGGG GAGGGGTATC GAAAAATCTG GGCCCGCCTC
CGGTTGCAGG ATATACGCAC CTCCCCGCGC CGTGTGTTGA GGGTGATGCG AGAAAATAAC
CTGCTGGTTT TCCAAAATAC CAGCATACAT CCTGGACCCA AGGCGCACGA TGGAACGATT
ACCCAAGAAA GCAGTCATGT TATGTGGGGA ACAGACATGA CCAAGGCGTA CACCATCCGT
GATGGGTGGG TGTCTGTTTT CGGTGCTGTA GACCATTTCT CAGCAGCTTG CATGGGCCTG
CATGCAGCAA AGCCAGGGAC TCGTTTCGAA GCGGTTGAGC CAGTGCGTCA GGGCGTTCGT
GAGGCCTTTG GCGCTATCGA ACAACACATG GCGCAGGGAA TTACGATGCG GCATGATTGT
GGGTCGCAAT ACCTCTCCAA GGTCTTCCAG GATGAGTTGC GATTTCTTGG GTTCACCATA
TCCCCGGCGT TCGTACGTTC ACCGCAATGC AATGGTTGCA TTGAACGCTT TTTCCGGACC
CTCAAGGAAA ATCTGCTTTG GGTGCGGTCC TTTCAGGATA TAGAGGAACT CAGCCAAGCG
CTTCAGGAGT TCAAAGAGCA GTACAACACG CAATGGCTTA TTGGCAGGCA CGGCTACCAG
ACGCCCTACC AGGTATTAGC AAGCCACAGG CCTCAACAAG GTTTAGCAGC CTGA
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| Protein sequence | MSQAVSASTG KAYTMRRVCR VWRIPRSTVY HRLQQSKQCS SRPRGPKAFY SDAELVAHIK
DLLEQSPFHG EGYRKIWARL RLQDIRTSPR RVLRVMRENN LLVFQNTSIH PGPKAHDGTI
TQESSHVMWG TDMTKAYTIR DGWVSVFGAV DHFSAACMGL HAAKPGTRFE AVEPVRQGVR
EAFGAIEQHM AQGITMRHDC GSQYLSKVFQ DELRFLGFTI SPAFVRSPQC NGCIERFFRT
LKENLLWVRS FQDIEELSQA LQEFKEQYNT QWLIGRHGYQ TPYQVLASHR PQQGLAA
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