| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1000 |
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| Symbol | |
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| ID | 8418822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1174184 |
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| End bp | 1174942 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037569 |
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| Product | ABC transporter related |
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| Protein accession | YP_003197866 |
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| Protein GI | 258405124 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
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| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.17941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00974436 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGCGAC TGGTGAATCT GCACGTTTCC GTTGGGGACA AAGAGGTGCT CAAGGGCGTC
GATTTGGAAA TCGCCGACGG GGAGACGTTT ATTTTGTTTG GGCCGAACGG GTCGGGGAAA
ACGACCCTGC TGATGACCTT GATGGGGTTT GCCGGATACA AGGTTACCAA GGGCAAAATC
CTGTTCCGTG GTGAAGATAT CACCAGCTGG CCGGTCCATG AGCGGGCCAA GTTGGGAATC
GGCATGTCGT TCCAGCGCCC TCCGACCATC CATGGCCTGA AGACGCGCCA ACTGGTTGAA
TTGTGCGCTC AAGGGCGTGA GCGCGATGTC GAGGATCTGG CGCGCAAGGT CAATTTTGAG
CAATTTCTGG ACCGGGACAT CAATGCTGGC TTTTCCGGCG GGGAAATCAA GCGCTCTGAG
CTGTTGCAGC TCATGTCCCA GGAGCCCAAG CTGCTTTTGT TTGATGAACC GGAATCCGGT
GTGGACCTGG AAAACATGAA ATTGATCGGG AAGACGGTCC GGGACCTGTT GCAGGGTGAT
CTCCAGCCGC GCTCGGACAT GAGCATGAAG GAGCTCAAGG CCCAGCGCCA GACCTCCGGG
CTGATTATCA CTCACACGGG CTATATTCTG GATTACATCA ATGCCGATCG CGGCAAGGTC
ATGTACGACG GCGTCTTATG CTGCGAAGCC CGGCCCCGGG ATATTCTGGA TCATGTCAGC
CAGTACGGCT ATCAGGAATG CGTGCGCTGC CTGAACTAA
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| Protein sequence | MLRLVNLHVS VGDKEVLKGV DLEIADGETF ILFGPNGSGK TTLLMTLMGF AGYKVTKGKI
LFRGEDITSW PVHERAKLGI GMSFQRPPTI HGLKTRQLVE LCAQGRERDV EDLARKVNFE
QFLDRDINAG FSGGEIKRSE LLQLMSQEPK LLLFDEPESG VDLENMKLIG KTVRDLLQGD
LQPRSDMSMK ELKAQRQTSG LIITHTGYIL DYINADRGKV MYDGVLCCEA RPRDILDHVS
QYGYQECVRC LN
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