| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0991 |
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| Symbol | |
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| ID | 8418813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1165870 |
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| End bp | 1166844 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037560 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_003197857 |
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| Protein GI | 258405115 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0395989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000851053 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAT CAGCGGCGGA AACCGCCACC CAGCAGGAGA CGGCCGATGA AGGCCGCATG
GGGCTGATCG ATCACCTCAA CGACTTGCGC AAAAGTATTG TCCGTTCGGT TGTGGCTGCG
TTGGTGGGCA TGGTCGCCTG CTATGCGTTC GCCCAAAAGC TTTTTGATTA TCTGATGCTC
CCCTTGTACA AGGCCCTGCC CGAAGGGAGT ACGCTGATCT ACACCGCCCC CCACGAAGCC
TTTTTTACCT ATATCAAGGT CGCCTTTGTG GCTGGGCTCT TTTTGACCAG CCCGTTCATC
TTTTACCAGT TCTGGTCCTT TGTCGCCCCC GGTCTGTACA AGCATGAGCG CAAGTGGCTC
ATCCCTATCG CCTTTTTCTC AGCGGCCTTT TTCTGCACCG GAGCCATTTT CGGCTACTCC
ATCGTTTTCC CCTGGGGCTA TAAATTTTTC ATGGGTTTTG CCGAGGACCT CATTCGGCCC
ATGTTGACCA TGCGCGAGGC CTTCTCGTTT GCCATGCGGC TGCTGATCGC CTTTGGGGTC
GTTTTTGAAC TGCCGCTGGT CATCTTTTTC CTTGCCCGAC TGGGACTGGT GAACGCCGCC
TGGCTCCGGA AAAAACGCAA ATATGCTATT TTAATAGCTT TCATTCTTTC TGCCTTGTTG
ACGCCACCGG ACATGGTTAC CCAGAGCTTC ATGGCCGGCC CTTTGGCGTT GCTCTATGAA
CTCAGTATCT GGGTCGCGGC TGTTTTCGGC AAGAAACGGC CGGAAAAAGA AGATGCGGAA
GAGGCTGGGG CAAACGCGAA GGCTGAAGAG GCTGATGAAA CAGCTGCCAG CGATCCCGAA
GCCTCGTCCG AGGCCCATGA AGAGGAATTG CTCCGGGAGG ATGCCGCCTC TTCGGACGAG
CAGGACGATG ACGACGGGGA TGAGGACGCG ACCACTGAGC GCAAGGAGGA CGGGTATGCG
CCGGACGACT ATTGA
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| Protein sequence | MSESAAETAT QQETADEGRM GLIDHLNDLR KSIVRSVVAA LVGMVACYAF AQKLFDYLML
PLYKALPEGS TLIYTAPHEA FFTYIKVAFV AGLFLTSPFI FYQFWSFVAP GLYKHERKWL
IPIAFFSAAF FCTGAIFGYS IVFPWGYKFF MGFAEDLIRP MLTMREAFSF AMRLLIAFGV
VFELPLVIFF LARLGLVNAA WLRKKRKYAI LIAFILSALL TPPDMVTQSF MAGPLALLYE
LSIWVAAVFG KKRPEKEDAE EAGANAKAEE ADETAASDPE ASSEAHEEEL LREDAASSDE
QDDDDGDEDA TTERKEDGYA PDDY
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