Gene Dret_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0990 
Symbol 
ID8418812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1165451 
End bp1165873 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content56% 
IMG OID645037559 
Producttwin-arginine translocation protein, TatB subunit 
Protein accessionYP_003197856 
Protein GI258405114 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB
[TIGR01411] twin arginine-targeting protein translocase, TatA/E family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0122855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000780107 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCGGCA TCGGAACCAC CGAAGTATTG ATCATTCTTG CCGTGGCCCT TGTGGTCATT 
GGGCCGAGTA AGCTCCCGGA ACTGGCCAGG ACCTTGGGAA AAGGGATGGC TGAGTTTCGC
CGCATGAGTT CGGATTTGAA GCATACCATT GATATGGAAG CCGACCGTTC TGACAGCGAG
CAGAAGCGTT CCGACGCGCA GAAAGAATTG TTCGGCGATA AGAACGAACA ATCCAAGCGT
GCCGAACAGC AGGAAGCCAG TGACCAGGAA AAGACAGCGG CCTCAGACTC CCCTTCAGAA
GTGGACGAAG CGGTGGCCTC CACGGAAAAA ACCGTTCAGC GCGAAGCAAA CGGACAGGAC
CGGACGGTCT CGGCTGAGAC ACCCCAATCT GGATCCGGCG AGGACAAGGA GCCCAAGGCA
TGA
 
Protein sequence
MFGIGTTEVL IILAVALVVI GPSKLPELAR TLGKGMAEFR RMSSDLKHTI DMEADRSDSE 
QKRSDAQKEL FGDKNEQSKR AEQQEASDQE KTAASDSPSE VDEAVASTEK TVQREANGQD
RTVSAETPQS GSGEDKEPKA