| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0980 |
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| Symbol | |
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| ID | 8418802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1155390 |
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| End bp | 1156439 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037549 |
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| Product | protein of unknown function DUF21 |
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| Protein accession | YP_003197846 |
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| Protein GI | 258405104 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.289763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000463308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGCAAC TCGTTCTCGC GGTTGGGCTG GCCATCGGCA TCTCCTTCCT CTGTTCGGTC
GCCGAGGCTG TGCTCTATTC AGTCCCGTGG AGTCATATCG AAAAGCTCCG GAGGTCGGGG
GAGCGCAAAG GGGAACTCCT CTACCGGCTC CGAGTCGATG TAGACGAGCC GATCACCGCC
ATCCTGACCC TGAACACCGT GGCCCATACT GCGGGGGCCT CTGTGGCCGG TGCAGCGGCG
GCGCAGGTGT TCGGCCAAGA ATCCCTGTTC GCCTTCTCCG TTTTCTTCAC CCTGGCCATC
CTCCTGCTAT CGGAGATCAT TCCCAAGACC CTGGGCGTCG TGTATACCCG GGGGCTCTCT
TTGTGGGTGG CGCGCCCCTT ACACCTCCTG GTCTTTGTCA TGCGGCCCAT TGTGAACGTC
TCCAGCTATC TGGTCCGTTT TTTGGGTAAG CGCAAGCTCG GTCCGGAGGC CTCGGAAGAG
GATGTCCGGG CCATGGTCAG CCTCTCGCGC CAGGCTGGAG TGCTCAAGCC CTACGAAGAG
ATGTCCATCA AGAATATCCT GACCCTGGAC AGCAAACGGG TCAAAGATAT TATGACCCCA
CGGATGGTCA TTTTTTCCCT GCCGGCGCAT TTGACCGTGG CCGAGGCCCG GGAAGCCAAA
TTGGTCTGGC CCCACAGTCG GATCCCAGTC TATGAAGGCG ATGATCCCGA AGAAGTCATC
GGCATCGTCT ATCGCCGTGA ATTGCTCGAA GCACTGGCCG ACGACCAGGA CACACGGCAT
CTCAGCGATC TGATGCGCTC TGCCCACTTT GTCCTGGAAA GCCTGACCCT GGACCGGCTT
TTGGTCCAGT TTCTGGAGTC ACGGATGCAC TTGGCGGTGG TCCTTGACGA ATACGGCGGA
CTTGCCGGGG TGGTGACCCT GGAAGACGTT CTCGAAGAAA TTCTTGGCAA CGAAATAGTT
GACGAAACCG ACCAAGTTGT GGACATGCGG GAACTGGCCC GGCAGCGCCG GGAGAAGTTG
GTGCAGGAGC GGCGGAAATC GCATTCCTGA
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| Protein sequence | MLQLVLAVGL AIGISFLCSV AEAVLYSVPW SHIEKLRRSG ERKGELLYRL RVDVDEPITA
ILTLNTVAHT AGASVAGAAA AQVFGQESLF AFSVFFTLAI LLLSEIIPKT LGVVYTRGLS
LWVARPLHLL VFVMRPIVNV SSYLVRFLGK RKLGPEASEE DVRAMVSLSR QAGVLKPYEE
MSIKNILTLD SKRVKDIMTP RMVIFSLPAH LTVAEAREAK LVWPHSRIPV YEGDDPEEVI
GIVYRRELLE ALADDQDTRH LSDLMRSAHF VLESLTLDRL LVQFLESRMH LAVVLDEYGG
LAGVVTLEDV LEEILGNEIV DETDQVVDMR ELARQRREKL VQERRKSHS
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