| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0975 |
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| Symbol | |
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| ID | 8418797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1149933 |
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| End bp | 1151690 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037544 |
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| Product | ABC transporter related |
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| Protein accession | YP_003197841 |
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| Protein GI | 258405099 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.685046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000181513 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCAAG CTATTCGTGA ATCCGCCTTG TGGCGACTGC TGCCTTTGAC CTGGCCTTAC
AAGCGACAAA TCGCCGTGGG GCTTGGAGCC AACGGGTGCG CCCGATTTTT CGACCTCCTG
CCAACCCTCA TTGTCGGGCA GGTCGTGGAC GCTATTGAGC AGGGGCGTGT CTTGCCGGAC
CGGTTTGTGA CTTATGCCCT GCTGGTCCTA GCGACGTTTG CCGGGCTTGC TGTCTTCCAG
TCCTTGAGCA GTTACAATCT CGGAACCATG GCCCAGAAGG TCCGCCATGA TCTGCGCACG
GCGTTGTACC GGCATTTGCA ACGTCTGGAC ATGACGTTTT TCGGTCGACG GCAGACCGGG
GATATCCTGG CCGTGGTCTC CAACGATGTG GACAGTCTGG AGACCTTTTT TTCGGATACC
AGCACGAGCT TGGTGCGGAT CGTGATTACC TTTTTCGGTG TTTACGGCAT CCTGCTCTAT
TTGGACTGGC GACTGGCTTT GGTGTTGTTT GTTCCGCTGC CGCTGGCATT GTGGGCGGTG
CGTTTTTTCG CCCGCCGGGT TCAGCCGCAG TACCGGCAGG CCAGACAGGC CGTCGGGCGT
ATCAACAGTC TGGTCGAAAA CAATATCAAC GGCATGGAAG TCATTCAAGC CTATACAGCC
GAGGCCGAGC AGGACCATTT CGTCAACGAA CAATCCTCCC TGTACCGGGA TTCGGTCTGT
TCCGCCCTGT GGGAGCGGGC CAGGTTCATT CCCTTGATTT ACCTGATCGC GGGAACAGCC
TTTGCCCTGC TCATTGGACT TGGCGGATGG TTTGCGGCCC GCCCGGCCGG ACCGAGTCTC
GGGGAGTATG CGACATTTAT TCTTCTGGCC ATGCGGCTCA TTTTGCCCAT TTTCGCCGTG
GGGCGGTTGC TCAATCAGGT CCAGCGCGCC GAAGCGTCGG CGCGGCGCAT TCAGGAAGTC
TTTCAGCGGC AGCCGCTTAT TCAGGATGCG GCCGGGGCCG TTGCCCTTGC TGAGCCCATT
GAACGTCTAG AATTCGAAAA CGTCAGTTTT GCCTATCAGC CCGAGATGCC GATACTCCAA
AATGTCTCTT TTGCTGTAGG TCGGGGAGAG ATGCTGGGAG TGGTCGGGCC AACAGGGGCC
GGAAAATCGA CGCTGGTCAA ACTCCTGCTG CGCATGTACG CCCCGGAACA GGGCCGCATC
AAGGTCAACG GTCGGGATCT CGACCAGCTG ACCCTGGCCA GCGTCCGCGG GCAGGTAGGG
TATGTCTCCC AGGACGCCTT TATTTTCCAG GGCAGTGTCG AGGACAACAT CCGGCTTGGC
TCACCCGAGG CCTCCAGTGA AGCGGTCCGC GAAGCGGCCC GTATCGCCGG GGCTTTGGAG
TTTATTGAGG TTTTGCCCAA GGGCTTTGCG ACCTTGCTCG GCGAACGGGG GCTGAGCCTC
TCAGGGGGAC AGCGGCAGCG GATCTCTTTG GCCCGGGCGG TGCTGCGCAA TCCCCCGCTT
CTTGTCTTGG ACGAGGCGAC TTCCTCGGTG GACACAAAGA CCGAGGAATT GATTCAGGAC
AATCTCCAGA GTCTGCAACA CGACCGTCTG GTGATTGCCG TGGCCCACCG CTTGTCCACG
GTGCGTCAGA GCTCGTCGAT CATGGTTCTG GTCGATGGCC GCGTGGCCGA ATACGGCACC
CATAACGAAC TTGTGGCCCA AAAAGGGGTC TATGCCGGAT TGTGGCGGGT GCAAAGCGGC
GGAGCGCTGT GCGAATAG
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| Protein sequence | MHQAIRESAL WRLLPLTWPY KRQIAVGLGA NGCARFFDLL PTLIVGQVVD AIEQGRVLPD
RFVTYALLVL ATFAGLAVFQ SLSSYNLGTM AQKVRHDLRT ALYRHLQRLD MTFFGRRQTG
DILAVVSNDV DSLETFFSDT STSLVRIVIT FFGVYGILLY LDWRLALVLF VPLPLALWAV
RFFARRVQPQ YRQARQAVGR INSLVENNIN GMEVIQAYTA EAEQDHFVNE QSSLYRDSVC
SALWERARFI PLIYLIAGTA FALLIGLGGW FAARPAGPSL GEYATFILLA MRLILPIFAV
GRLLNQVQRA EASARRIQEV FQRQPLIQDA AGAVALAEPI ERLEFENVSF AYQPEMPILQ
NVSFAVGRGE MLGVVGPTGA GKSTLVKLLL RMYAPEQGRI KVNGRDLDQL TLASVRGQVG
YVSQDAFIFQ GSVEDNIRLG SPEASSEAVR EAARIAGALE FIEVLPKGFA TLLGERGLSL
SGGQRQRISL ARAVLRNPPL LVLDEATSSV DTKTEELIQD NLQSLQHDRL VIAVAHRLST
VRQSSSIMVL VDGRVAEYGT HNELVAQKGV YAGLWRVQSG GALCE
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