| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0944 |
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| Symbol | |
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| ID | 8418764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1116488 |
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| End bp | 1117654 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037511 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_003197810 |
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| Protein GI | 258405068 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0611757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00545793 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGCT GGATAATTTT CTTGGCCCTT TTGGCCGCCT TTCCGCCACT TTCAACAGAT
ATGTATCTTC CAGCTATCCC CAACCTGGTT CGGCTGTGGG ATAAGCCGCT GTGGTATATC
AACTTGACAC TGATCGTCTT TTTCGTGACC TACAGCTTTT TTTTACTCGT CTACGGCCCT
TTGTCCGACA GATGGGGGCG CCGCCTGGTA TTAAAAGCAG GCATATCTCT CTATGTCGTA
GCCAGTTTCC TTTGCGCCTT GGCTCCCAAT GCACTGACGC TCATCGTCCT GCGCATGCTC
CAAGCCGCAG GAGCAGCTTC AGCAGCTTCT CTGGCGCTGG CCTTGTCCAA GGATGTCTTC
GGATTCCACG AACGAGAGAA AGTCCTGGCC GCGATCGGGG TGGTCATTGC CTTGGCCCCC
ATGTCGGCGC CAATTATTGG CGGCTGGACT ATGGCAATTG TTTCCTGGCG CTGGATATTC
ATCCTTCTTG CCGGCTTCGG CATTGTCGCC TTGATCGGTG TGCATAGAAT GGAAGAAACG
CTCCATCCCG ACCTCAGAAC GCCGCAACTC AGACTGATCG CCGACTATCT TCAATTGTTG
CGCAATCGAG CCTATATCGC ATTGGTCCTC GTTGTCTCTC TGGCCATTGT GCCTTTGTTC
GCCTTTATTG CAGCGTCATC GGAGATTTAT ATCTCCCGCT TGGGCCTGAG CGAACAGGCC
TACGGGTACT TTTTCGGCTT TAATGCCCTG GCACTCATGA GCGGGTCCCT TGTCTGCACC
CGCATCAGCG GTAAAATCAA ATCACAAACT ATTCTGACCT TGTGCTATCT CGGGGTTACT
CTGGGCGGAG TGCTGCTTGT TCTGGTGCCA CATACATCCC CTTGGTCCCT GGCCCTGCCG
ATGTTGGCCA TCTCCTTTTC GGCGGGCTTG AGCCGCCCAC CGAGCAACAA CTTAGTGCTT
AAACAGGTCC AGCAGGGAGC AGGGGCCGCT TCCTCCCTCT TGATGTTTAC GTTGATGACC
GCTGGAGCGA TAGCGATGGG CGTGATCTCT CTGGGATGGG AAGACAAAAT CACGGCGCTG
GGGATAATGG GAAGCGTCTG TGGCCTGTTG GGAAGTATTT TGTGGTGGGG CTTGAAACGC
AAACTGTATA TCCAAACTGC GACATAG
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| Protein sequence | MKRWIIFLAL LAAFPPLSTD MYLPAIPNLV RLWDKPLWYI NLTLIVFFVT YSFFLLVYGP
LSDRWGRRLV LKAGISLYVV ASFLCALAPN ALTLIVLRML QAAGAASAAS LALALSKDVF
GFHEREKVLA AIGVVIALAP MSAPIIGGWT MAIVSWRWIF ILLAGFGIVA LIGVHRMEET
LHPDLRTPQL RLIADYLQLL RNRAYIALVL VVSLAIVPLF AFIAASSEIY ISRLGLSEQA
YGYFFGFNAL ALMSGSLVCT RISGKIKSQT ILTLCYLGVT LGGVLLVLVP HTSPWSLALP
MLAISFSAGL SRPPSNNLVL KQVQQGAGAA SSLLMFTLMT AGAIAMGVIS LGWEDKITAL
GIMGSVCGLL GSILWWGLKR KLYIQTAT
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