Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0940 |
Symbol | |
ID | 8418760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1114195 |
End bp | 1114662 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645037507 |
Product | hypothetical protein |
Protein accession | YP_003197806 |
Protein GI | 258405064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0606896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00778912 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATTG TATTCGCAAT CACCCTTTTG CTCGCTATTG CAATGGGTTC GGCGCAGGCT GGCCTGTCCT TGGACCTGGA GGAATACCGG TGGAAAAATC GTTTGTTGAT CATCTTCGCC CCTTCAAAAA CGGACCAGAC TTATCTGAAA CTGCAACACG CCTTGGATCG GGCAGAGGAT GCCCTGCAAG GCCGGGATAT GCTTGTTTTT CATCTCTTTG CTTCAGGCAG CGGCTGGGTG GGGGACATCC CTGTGCATGC CGAGGCTGTC CGCTCTTTTT ATCGCCGCTT TGACGTGCAG GACCAGGATC TGAACCTGAT TCTGATCGGC AAGGATGGAG GAGAAAAAGT CCGGCAGGTG GGCAGTTTTG ATCTGCAGGA TATCTTTGAT CGTATTGACG CCATGCCCAT GCGCCAACAG GAGATGAGGG AGCGCCGGGA GATAAAGAAT GGGGGGGCCG CTGATTGA
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Protein sequence | MKIVFAITLL LAIAMGSAQA GLSLDLEEYR WKNRLLIIFA PSKTDQTYLK LQHALDRAED ALQGRDMLVF HLFASGSGWV GDIPVHAEAV RSFYRRFDVQ DQDLNLILIG KDGGEKVRQV GSFDLQDIFD RIDAMPMRQQ EMRERREIKN GGAAD
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