| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0936 |
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| Symbol | |
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| ID | 8418756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1110149 |
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| End bp | 1112560 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645037506 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003197805 |
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| Protein GI | 258405063 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0173561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCACA GTGATGAGAA TAAATGGGAA TCGATGTTTA CCTATGCACC ACTTCCTTAT
CAATCTCTTG ATTGCGATGG AAATTTTTTA GATTTTAATA GTGCATTTAT GAATGTACTT
GGCTATGAAA AGAATGATCT CATAGGAAGA AACTTTTCTG AACTCTTACA TCCTGACTGG
GTCGAGCACT TTAAGGAGAA CTTTCCCCGG TTCAAGGCTG TAGGTGAAAT CCTTGGTGTG
GAATTTGAGA TGATCAAAAA AGATGGCTCA TCTATTTTGG TTCATTTTCA TGGCAAAATT
CAGCACAATG AGCTTGGTGA GTTTGAAAGA ACACATTGTA TTTTTCAAGA TGTTTCTTCA
CAAAGGGCAG CTGAAATTGC GCTTCGCCGC AGTGAAGAGC GTTTCGCTCA AATTAACAAA
GTGCTTCTTG AGCTTGGCAC AGATTATAAA AAGAATATAC ATAATTTAAC GGCCTTGGCT
GGGCAAATGT TGGGTGGAAC TTGCGCTCTT TATAATCGCT TGGAGGGAGA CCTTCTCTGC
TCTGTCGGCC AGTGGAAGAC TCCGGTAGAT TATGACCCCT GTGATTTTCC AGAAGGCCAT
ATATGCTATG ACGTCATTTA CCAACAGAAA GATGATGTGC TTGTCATTGA AGATTTGCCA
CGCTCGATCT ACGCACAAAC CGATCCGAAT GTGAACAAAT ATAATCTGCA GACCTATGTT
GGGAAATGCG TTTTTTGTTC TGATGACCCC GTTGGGTCAT TGTGCGTGGT TTTTCAATCT
CCACTGGCCC CATCAGACAA TGACAAGCGA TTTCTCAGCA CCATCGCAGC TGCTATTTCG
CGTGAGGAGG GACGCCATCA AGCCGAACAG GCGGTTCAAG CAAGCAATGA GCTCATCAGC
AGTATTCTTA GAAGCGCACC GGTTGGTATT GGTCTTGTTG ACCGAGATCG CACTATAGTC
GAGGTCAATG ACCGTTTATG TGCTATGACA GGATATACCA AGGAAGAGCT TCTTCATCAG
CACGCAAGTG TTTTTTATCC CAGTAATGAT GAATTTGAGC GTGTTGGCAA CATCAAATAC
GAGCAGCTTC ACGGCGAAGG CTATGGCAAT GTTGAGGCAA TCTGGCAACG GAAAGATACG
TCGCTGATCC ATGTTCGACT TACCTCTACA CTTCTGGACC CCCAAGACCC CTCGCGAGGT
GTCACGTTTT CAGCCCTGAA TATCAGTGGT GAAAAGCTGG CTAAGGAGGA GCAGGCAAAA
CTGCAAGCAC AACTCGCGCA GTCAAACAAA ATGGAATCTC TTGGGCGCCT GGCTGGAGGT
ATTGCTCACG ATTTTAATAA CGTGCTTCAT GTGATAAGTG GTAATCTCGA AATGATGGCC
TTACGCAGTA ATTCGCAGCA GGCCGTTGGG CTAAATCGAA TCCAAACTAT TCAGAAGTCG
ATTGATCGGG CGTCACAATT GGTTCAACAG ATGCTTTTAT TCAGCCGCAA GGCGGAAAGC
TATAAACAGA GTGTAGATTT AAATGAAGAA GTCGAACAGA CTCTCCATAT TCTGGAACGC
AGCGTTCCCA AAATGATTTC CATAGAAACC TTTCTGCCTG ACGGCCTTCC TCCAATTTCA
GCTGATCCGG TCCAGGTTGA ACAGGTTCTT TTGAACTTGG GCAGTAATGC TGAAGCGGCT
ATGCCCGCCG GTGGCAGGTT TATTGTTGAA ACCAGTGACA TCTTTTTAGA CCATGACTTC
GTCCGTATGC ACACCGAGGC AAAAGAAGGG CGATACATTT GCCTCTCTGT ATCAGATACC
GGCCACGGTA TGGATGACAA GACACTGAAC CATGTTTTTG ATCCCTTTTT TACAACCAAA
GAGATCGGCA AAGGGACCGG GCTGGGCTTG GCCTCGGTCT ATGGAATAGT GAGAGCACAT
GATGGGTTTA TCCGCTGTTA TAGTGAACCA GGAAAGGGAA CAACGTTTCA TATTTATTGG
CCGGTTGTGT CTACTCAAAA AGATGGTGCA AAGCAAAAAG GCCAGATGTC TCACCAAGAT
CTTGAGTCTG GAGAAGAAAC GATCCTTATC GTCGATGATG AAAAGGATAT TCTCGAATTG
ACCGCCGAAG CCTTAGAAAT TCAAGGCTAT ACTGTCTATA TGGCCGAAAA CGGAGAACAG
GCCTTGGCCA TGTACTCAAA GTATGAAGAA TCTATTGATT TAGTTATTCT CGATTTGAAC
ATGCCCGGGA TGGGTGGCGC ATCATGTCTA CGCCAACTCA AGAAACTGCA ACCAAGTATA
AAAGTGATAC TGGCAAGTGG TTACTCAGCG CATGGTCAAG CCCAAGAGAT TGCTGACCGA
GCTTCAGCAT TTATCGGTAA GCCGTATCAT TTACGAGAAT TGTTGAAAAC AATTCGTCGA
GTAATTTCGT AG
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| Protein sequence | MPHSDENKWE SMFTYAPLPY QSLDCDGNFL DFNSAFMNVL GYEKNDLIGR NFSELLHPDW
VEHFKENFPR FKAVGEILGV EFEMIKKDGS SILVHFHGKI QHNELGEFER THCIFQDVSS
QRAAEIALRR SEERFAQINK VLLELGTDYK KNIHNLTALA GQMLGGTCAL YNRLEGDLLC
SVGQWKTPVD YDPCDFPEGH ICYDVIYQQK DDVLVIEDLP RSIYAQTDPN VNKYNLQTYV
GKCVFCSDDP VGSLCVVFQS PLAPSDNDKR FLSTIAAAIS REEGRHQAEQ AVQASNELIS
SILRSAPVGI GLVDRDRTIV EVNDRLCAMT GYTKEELLHQ HASVFYPSND EFERVGNIKY
EQLHGEGYGN VEAIWQRKDT SLIHVRLTST LLDPQDPSRG VTFSALNISG EKLAKEEQAK
LQAQLAQSNK MESLGRLAGG IAHDFNNVLH VISGNLEMMA LRSNSQQAVG LNRIQTIQKS
IDRASQLVQQ MLLFSRKAES YKQSVDLNEE VEQTLHILER SVPKMISIET FLPDGLPPIS
ADPVQVEQVL LNLGSNAEAA MPAGGRFIVE TSDIFLDHDF VRMHTEAKEG RYICLSVSDT
GHGMDDKTLN HVFDPFFTTK EIGKGTGLGL ASVYGIVRAH DGFIRCYSEP GKGTTFHIYW
PVVSTQKDGA KQKGQMSHQD LESGEETILI VDDEKDILEL TAEALEIQGY TVYMAENGEQ
ALAMYSKYEE SIDLVILDLN MPGMGGASCL RQLKKLQPSI KVILASGYSA HGQAQEIADR
ASAFIGKPYH LRELLKTIRR VIS
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