| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0930 |
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| Symbol | |
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| ID | 8418750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1100795 |
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| End bp | 1103005 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 645037500 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003197799 |
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| Protein GI | 258405057 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.165473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.215499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGA GCTGGCTGGA AAAGATGCAA ACCTACGCCA CCCCTCATAA CCACTTATGT
TTGATTTACG ATTCCCTGAA CGCCTACAGG GAAGTCGCTT CTGAATTTAT TGCAAATGGC
CTAAACAACA ACGAAAAGTG TATTATAGTT ATAGATAGAT ATAATACTAA AATGCTTGAG
CGGGATCTTG CGAAAAAAAA TATAGATTTG ATCCAGTATA TGGATACTGG CCAGATATCT
GTGCTGAATG TAGAGGATCA TTATTGTGAA GATGACAGCT TTGATCCAGA AAAAACGATC
CAAAACTGGA TCACTGAAAT CGAAAAAGCC TCGCAGGAGG GATATAGAGC CCTTCGTGCG
TTAGGTGAGG CTACTTTTTC CTTAAAAAGT CAAGATGGAC AGGGGGCTCT TATAAAGTAT
GAGAACTTAC TCAATAAACA TATTTTCTCC CACTATCCAT TTGTATCATT GTGCGTATAC
GAAAAAGACA AGTTCTCAGC CAAAACTATT CGTGACGCCA TTCGCGTACA CCCGATTTTA
ATCCATAACA CGAATTTTTT TGAGCAAAAC ATTTACTATG TCCCTCCGGA AACATTTGAA
AAGAAGGACA CGGACTTTTC AGAAGTCGAG AGAATGCTGC ATAACACCTC AAAAAACAAC
TCAAACATTC AAAAATTGCG TGATAGTGAA AAAAAATACA GAACCCTTTT TGAAAACTCT
ATCGACGCAA AACTTATAGT CAAAAATTTC AGCATTGATG ATTGCAACTT AACTACAATA
AAAATGTTTG GCTTTAATGA CAAATGTGAA ATCATTGGTC GTTCTATATA CGACCTCTTC
CCCAATGAAC AGCGTGAGAA CATTTTTTCT CAAAAAATAT TGGACAATTC TTTCATATTT
GCTACCTCTC AGCCTGTAGA AAAGGAAAAT TTTCTCTGTA AACGAAAAGA CGGGAAAATT
TTTGAAAGCT CTATGTGGAT CAAGACATTA TATGAATTTT CAAAAAATTA TTTAGTTAGC
ATTCGTGACG TTTCAAAACA AAGAGAACTT GAGAAGCAAC TTCATAACGC GCAACGCTTA
GAATCAATTG GACGACTAGC AGGAGGCGTT GCACACGACT TCAACAATTT ACTCAGCCCC
ATACTAGGCT ATTCTGAACT ATTGATGCGT GGAAAAATAA GTCAAGACAG ATTTTACGAA
TGCATAGGCC ATATTTACGA ATCCGGCAAG CGAGGCAGAG AATTGACACG GCAACTTTTA
GCATTTGGTC GTAAGCAAAA TCTTGCGCTA CATGGTCTTG ATATTAACCA GATTATATAT
GACCTGCTCA AACTTCTCAG GAAAACAACC CGTGAAAATA TTCAGATCGA AACAACATTA
AATGCTTGCT CGGCTGGTTT TTTAGGCGAC ATCGGCCAAA TAGAACAAGT CATCATGAAT
TTGACTATAA ATGCCCAAGA CGCCATGCCG AATGGCGGTA AACTGTCTAT TGCAACCGAT
CATATCTATG CCGATGAAAA TTTTGTCGAA AACCTTCCCA AGATGGCACC CGGCCACTAT
GTCAGGCTTG TCATCTCTGA CACCGGGCAT GGCATGGATG ATCACACACA AGAACATATA
TTTGATCCTT TTTTCTCGAC AAAGGGCAAA GAAAAAGGGT CAGGTCTTGG ACTAGCCACT
GTGTATGGTA TAATCAAACA ACATGGTGGA TTTATTTTTG TTGAGAGCTC CCCACATAAG
GGAACCTCTT TTTCTATCTA TTTTCCTGAA AAAGATATTG AGCAAGAGGA AGAATCGAAT
ATGTGCACCA CAACGCAGCT TGTAAAATCT TTTAATAATG AAACCATTTT GCTTGTTGAA
GACGATCAGC TTTTAAGGGA ACTTGCAGTG GAGATGCTTG AAGAGCTTGG GTATAAAGTT
TTCAAAGCTC AAAATGCGGA TGAAGCGATA ACCATTTTTG ATGAACTAAA TTCTATAGAT
TTACTTTTCA CTGATATTGT CCTGCCCGAT AGAAACGGTC GCCAAGTCTA TGACGCTCTC
ATTCAAAAAC AAAAAAATAT TAAAGTCCTC TACATGTCAG GATATACTCA AGATGTTATT
GACAGCCATG GAATTTTAGA AAAAGGAGTT CACTTTTTAC AAAAGCCTTT CTCTATTTCC
GAACTTTCTG TTCATGTTTA TAATGTTATA CATTCTGATA AATTCAATTG A
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| Protein sequence | MQTSWLEKMQ TYATPHNHLC LIYDSLNAYR EVASEFIANG LNNNEKCIIV IDRYNTKMLE
RDLAKKNIDL IQYMDTGQIS VLNVEDHYCE DDSFDPEKTI QNWITEIEKA SQEGYRALRA
LGEATFSLKS QDGQGALIKY ENLLNKHIFS HYPFVSLCVY EKDKFSAKTI RDAIRVHPIL
IHNTNFFEQN IYYVPPETFE KKDTDFSEVE RMLHNTSKNN SNIQKLRDSE KKYRTLFENS
IDAKLIVKNF SIDDCNLTTI KMFGFNDKCE IIGRSIYDLF PNEQRENIFS QKILDNSFIF
ATSQPVEKEN FLCKRKDGKI FESSMWIKTL YEFSKNYLVS IRDVSKQREL EKQLHNAQRL
ESIGRLAGGV AHDFNNLLSP ILGYSELLMR GKISQDRFYE CIGHIYESGK RGRELTRQLL
AFGRKQNLAL HGLDINQIIY DLLKLLRKTT RENIQIETTL NACSAGFLGD IGQIEQVIMN
LTINAQDAMP NGGKLSIATD HIYADENFVE NLPKMAPGHY VRLVISDTGH GMDDHTQEHI
FDPFFSTKGK EKGSGLGLAT VYGIIKQHGG FIFVESSPHK GTSFSIYFPE KDIEQEEESN
MCTTTQLVKS FNNETILLVE DDQLLRELAV EMLEELGYKV FKAQNADEAI TIFDELNSID
LLFTDIVLPD RNGRQVYDAL IQKQKNIKVL YMSGYTQDVI DSHGILEKGV HFLQKPFSIS
ELSVHVYNVI HSDKFN
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