Gene Dret_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0928 
Symbol 
ID8418748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1097846 
End bp1098199 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content46% 
IMG OID645037498 
ProductIS66 Orf2 family protein 
Protein accessionYP_003197797 
Protein GI258405055 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0189204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.805776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTTGG GGCAGAGCCA GGCCAATGTC TATCTGGTCA CTGGCTACAC GGACATGCGC 
AAGGCCATCA ACGGTCTCTC CATAATGGTC CAGGCCCAAC TGGAACACGA TCCTTTTTCT
GGCCATCTCT TTGTCTTTTG CAACCGTAAA CAAACCATGA TTAAAATCCT TTACTGGGAT
CTCAATGGCT TTTGTTTATG GCAAAAAAAG CTCGAAAAAC ACATCTTCCA ATGGCCTCAG
TCGGAAAAAG AGGTCTTAGC GGTTCGGAAA CGCGAACTTC TCTGGCTTCT GGACGGGCTA
GACCTGGCAA AAACAAAAGG CCATAACAGA CTCAACTACA ACACATTATT CTAA
 
Protein sequence
MILGQSQANV YLVTGYTDMR KAINGLSIMV QAQLEHDPFS GHLFVFCNRK QTMIKILYWD 
LNGFCLWQKK LEKHIFQWPQ SEKEVLAVRK RELLWLLDGL DLAKTKGHNR LNYNTLF