Gene Dret_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0927 
Symbol 
ID8418747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1097508 
End bp1097849 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content58% 
IMG OID645037497 
Productputative transposase orf1 for insertion sequence element 
Protein accessionYP_003197796 
Protein GI258405054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0183947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.785347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACC ATTCCCAGGG CGATAAGCAA AACGTATCCA GCACGGCCGA GTACTGGCTG 
GAGCACATTC GCAAGTGGCA GGAAAGCGGC TTGAGCAAGG CCGAATACTG CCGGCAAAAT
GAATTAACCA AGCATAGGTT CTACTACCGT TGCCAGCGGC TCCAGCGAGT TGCCCCAGAA
GAGGGCACCG CCGTTGCCTT GCCGTTTCAA GCCAGCGATC TCGTCTCGAG CCGCTCCAGC
CTGACGATCA CCGTTGGTGA ACGCTTCCAC GTCGCCGTGG GAGGGGATTT CCACCCGCCT
GTTTTGCAAA AGCTCATCCA GACCCTGGAG CAGATGCCGT GA
 
Protein sequence
MDDHSQGDKQ NVSSTAEYWL EHIRKWQESG LSKAEYCRQN ELTKHRFYYR CQRLQRVAPE 
EGTAVALPFQ ASDLVSSRSS LTITVGERFH VAVGGDFHPP VLQKLIQTLE QMP