| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0913 |
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| Symbol | |
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| ID | 8418733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1084027 |
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| End bp | 1085478 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037483 |
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| Product | flavocytochrome c |
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| Protein accession | YP_003197782 |
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| Protein GI | 258405040 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.387235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGCC CAAATCAAGA GTGGGATGCG GCGACGGATG TGATTGTTGT CGGCAGCGGC
TTTGCCGGTT TGTCGGCGGC TATCGAAGCC CGGCAGGCTG GCGCCAAGGT GATGGTCCTT
GAGAAAATGC CGATCCCTGG GGGCAATTCC CGCATCAGTG ATGGCGCGCT CTGCGCTCCC
GGCAACTTTT TGCAGCGCGA ACACAAGGTC GAGGATTCGC CCCAGCTCTT CTACGAGGAC
ATATTGCGGG CCGGACGGAG CCGCAATCAT CCTCGGCTGG TGCGCGTCCT TGCCGAACAG
GCGGCAGCAG CGGTGGATTG GACGCGGGAT TTCCTCGGTG TGCCCTATTT GAACCGTGTG
GATCGTTTTG GCGGCCACAG TGCGGCCCGG GGCGTGACTT TTGCCTGTCA CAGCGGGTTG
GACTGCATCC GGGCCATGGT GGCCACCTTC GAGGGATTGG GCGGAGAAAT CCGGTACAAT
TGTCTGTTGG AATCCTTTCT TGTCGACGGG GATCGAACCC TTTGCGGCGT GCGGGTTCGA
GAGGGGAATT CCCGCACCCG CGAGGGCTCC GGGACGTCCA AACAGATTCG TGCTAACAAA
GGTGTGGTCC TGGCCACCGG GGGATTTGGC AATGACATCG TTTTTCGCAC CATGCAGGAC
CCGCAATTGG TCGAGGACAT AGCCAGTACC AATCATAAAG GCGCCACAGC AGACGGTCTC
CGGGCCGCCC TTGGCATTGG GGCCATGCCC GTGCAACTGG CCCATATTCA GCTTGGCCCT
TGGGGCTGCC CGGACGAGAA AGGCTATGGC ACGGCAGCGC GCTTCGCTTC GTATAGCGTT
TTCCCAGCGG GTATTCTGGT GGACCCGGAA ACCGGCCAAC GGTTCGTCAA TGAGTGGGGG
GATCGGAAGG TACGCACCGA CGCTATCCTG GCATTGGGGC ACCCTGCTCT CGGCATTGTT
GATGACCAAG GAGCACAATT GGATACGGAC AGCCTGCGTC ACGGCCTACA AACCGGGAAA
ATCCAGTCCT TTGACAGCCT GGGTGAGATC GCGGCGGCCT ATAATATGCC CAAAGAAACC
TTCCGCGCCA CAGTAGATGC CTACCACGAC GCGCTCAGTC GCGGTGTCGA GGATGCATTT
GCAAAGGATT TGGGCGCAGG AGCCGTGTCT CTGAGCACCC CGCCGTATTA TACACTCAGG
CTGTGGCCCA AGGTGCACCA TACCATGGGG GGCATCGGGA TCGACGAACA CGCCCGAGCG
CTGGATACCC GTGGACAGGT CATCCCCAGG TTATTTGCCG CGGGGGAGAG CTGTGGCGGG
GTGCACGGCG AGAGCCGGCT GGGAGGATGC GCCCTGACGG AATGCATCGT CTTCGGCCGC
ATCGCCGGCA AAAATGCTGC TGGCGAGGTG AGCAGAAGGA GCGAAGCGGA CGGAAACGCT
CGTATCATTT GA
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| Protein sequence | MECPNQEWDA ATDVIVVGSG FAGLSAAIEA RQAGAKVMVL EKMPIPGGNS RISDGALCAP
GNFLQREHKV EDSPQLFYED ILRAGRSRNH PRLVRVLAEQ AAAAVDWTRD FLGVPYLNRV
DRFGGHSAAR GVTFACHSGL DCIRAMVATF EGLGGEIRYN CLLESFLVDG DRTLCGVRVR
EGNSRTREGS GTSKQIRANK GVVLATGGFG NDIVFRTMQD PQLVEDIAST NHKGATADGL
RAALGIGAMP VQLAHIQLGP WGCPDEKGYG TAARFASYSV FPAGILVDPE TGQRFVNEWG
DRKVRTDAIL ALGHPALGIV DDQGAQLDTD SLRHGLQTGK IQSFDSLGEI AAAYNMPKET
FRATVDAYHD ALSRGVEDAF AKDLGAGAVS LSTPPYYTLR LWPKVHHTMG GIGIDEHARA
LDTRGQVIPR LFAAGESCGG VHGESRLGGC ALTECIVFGR IAGKNAAGEV SRRSEADGNA
RII
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