| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0900 |
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| Symbol | |
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| ID | 8418720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1065676 |
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| End bp | 1067517 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645037470 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_003197769 |
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| Protein GI | 258405027 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAATC AACCCATTGA GGATTATGGG ATCATCGGCG ACCTGCACAC GGTGGCCCTG
GTGGGGATCA ACGGGTCCAT CGACTGGATG TGCGTGCCCC GTTTCGATTC CCCAAGCGTA
TTCGGTGCCC TGCTTGATGC TGCCCGGGGC GGGGCGTACC AGATTTGTCC CGAGGACCGT
GAAGCGACCC ACAAGCAATT GTACTGGCCG GAGACCAATG TCCTGATCAC TCGTTTTTTG
TCGCCGCACG GCGCCGCGGA ACTGGCCGAT TTCATGCCCA TCGCCGATTC CGGGGAAGCG
CATTCTCACC AGCTTATCCG GCGGCTGACG GTCCTGCGGG GCACGGTGAG CTTTGTCATG
CGCTGCCGTC CGGCCTTCGA TTATGGGCGG ACGCCGCACG AAACAGAACT CACGGCCAAG
GGCGTTGTGT TTCGCTCCGA GGATCTTTCC CTCGGACTGG CCGCGGGCAT GGAACTCCAG
GCCGACGGCG ACGGCGTCTG GAGCCGGTTC ACCCTGGAGC AGGGGCACAG CGCGGTGTTC
GTGTTACGCC AGATCGGTCC GGAGGAAGGG TGCGGCGTCT GTCTCTCTGA AGAAGCGGCG
GAGCGGCAGT TCCGGGAAAC GGTGCGGTAC TGGCGGCGCT GGCTGTCCTC GTGCACCTAC
TCTGGACGGT GGCGCGAATC GGTCCACCGT TCTGCCCTGG CGCTCAAGCT TTTGACCTAC
GCCCCGACCG GAGCCATCGT GGCTGCCCCG ACCACGAGTC TGCCGGAGGC CCTGGGCGGG
GAGCGCAATT GGGACTACCG TTACACCTGG ATTCGGGATT CGGCTTTTAC CGTTTACGCT
TTTCTTCGAC TCGGCTTTAC CGATGAGGCC GAGCACTTCA TGGGCTTTTT GTCCCAGCTG
TGCACCGAGG CCCGGCACCA CGGCTCACCG TTGCAGATCA TGTACGGCAT TGACGGCCGG
CGGGATCTGC CCGAAGAGGT CCTGGACCAT GTAGAGGGGT ATGCCGGATC CCGCCCGGTG
CGGGTGGGCA ATGCGGCCTA TACTCAGCTC CAGCTTGATA TTTACGGCGA GCTTCTGGAC
GCGGTCTATT TGTTCAATAA ACACGGCGCT CCTATTTCCT ACGACCTCTG GCGCTCTATC
CGTTCGTTTG TCGATTGGGT CTGCGCTAAT TGGCACCGCC CGGACGAAGG CATCTGGGAA
ATGCGCAGCG GGCAGCAGCA CTTCGTCTAT TCGCGGCTGA TGTGCTGGGT GGCAATCGAT
CGCGGGTTGC GCCTGGCCGA GAAACGGTCG TTTCCGTGTG ACCGTCAGCG GTGGCTCGCG
GAACGCGACC GGATCTACGA AGACATTTTG ACCCACGGCT GGAGCGAAGA ACGCCAAGCC
TTTGTCCAGG CCTACGGCAG CCAGACCCTC GACGCCTCGA ACCTGATCAT GCCGCTCGTG
TTCTTTACTT CACCTACGGA CCCGCGGATG CTCAAGACCC TGGACGCCAC GCTCAAGCCC
CCGGAAGAAG GGGGGCTGGT GGCCAATAGT CTGGTGCACC GGTATAATCT CGAGGAAAGT
CCGGACGGAC TGGATGGAGA GGAGGGGACG TTCAATATCT GCACGTTCTG GCTCGTTGAG
GCCCTGACCC GAGCGGGGCG GTTCGATCCG GAACGGCTGG AAGAGGCGCG GCTTATCTTC
GAACGCATGC TCGGGTTCGC CAATCATGTC GGCCTGTATG CTGAAGAAAC CGGGGCCCGG
GGCGAGGCCC TGGGCAATTT TCCCCAGGCG TTCACCCATC TGGCGCTCAT CAGTTCGGCA
TTTAATCTGG ATCGGGCTTT GAGCCGGGGG CACACTGGCT GA
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| Protein sequence | MQNQPIEDYG IIGDLHTVAL VGINGSIDWM CVPRFDSPSV FGALLDAARG GAYQICPEDR
EATHKQLYWP ETNVLITRFL SPHGAAELAD FMPIADSGEA HSHQLIRRLT VLRGTVSFVM
RCRPAFDYGR TPHETELTAK GVVFRSEDLS LGLAAGMELQ ADGDGVWSRF TLEQGHSAVF
VLRQIGPEEG CGVCLSEEAA ERQFRETVRY WRRWLSSCTY SGRWRESVHR SALALKLLTY
APTGAIVAAP TTSLPEALGG ERNWDYRYTW IRDSAFTVYA FLRLGFTDEA EHFMGFLSQL
CTEARHHGSP LQIMYGIDGR RDLPEEVLDH VEGYAGSRPV RVGNAAYTQL QLDIYGELLD
AVYLFNKHGA PISYDLWRSI RSFVDWVCAN WHRPDEGIWE MRSGQQHFVY SRLMCWVAID
RGLRLAEKRS FPCDRQRWLA ERDRIYEDIL THGWSEERQA FVQAYGSQTL DASNLIMPLV
FFTSPTDPRM LKTLDATLKP PEEGGLVANS LVHRYNLEES PDGLDGEEGT FNICTFWLVE
ALTRAGRFDP ERLEEARLIF ERMLGFANHV GLYAEETGAR GEALGNFPQA FTHLALISSA
FNLDRALSRG HTG
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