| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0893 |
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| Symbol | |
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| ID | 8418713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1057398 |
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| End bp | 1059080 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037463 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_003197762 |
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| Protein GI | 258405020 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.100195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG AACCGAACAA AGTAATCTAT TCCATGGTCC GCGTGAGCAA ATACCACAAC
CGCCGCGCGG TCCTGCAGGA CATCTCCCTG TCCTTTTTCT ATGGCGCCAA GATCGGTGTC
CTGGGACTCA ACGGCTCGGG CAAGAGTTCA CTTTTGCGCA TCATGGCCGG CGTGGACACC
GACTACAACG GCGAAATCGT GGCTTCGCCC GGCTACAGTA TCGGTTTTCT GGAACAAGAG
CCCCAGCTCG ACCCGGACAA GACCGTACGC GAAGTGGTCG AGGAAGGCGT GGCCGAGACC
GCAGCTCTGC TCAACGAATT CAACGAGATC AACGCCCGTT TCGCCGAACC CATGTCCGAC
GACGCAATGC AGAAGTTGAT TGAGCGTCAG GGCGAAGTCC AGGAACTTTT GGACGCCCAC
GACGCCTGGG ATCTGGAATC ACGGCTGGAA ATGGCCATGG ACGCCCTGCG GTGTCCCGAC
GGCCAGAACC CGGTGAACAT CCTCTCCGGC GGGGAGAAGC GCCGGGTCGC CCTGTGCCGA
TTGCTGCTGC AAAAGCCGGA CATCCTGCTT TTGGATGAAC CGACCAACCA TCTCGACGCC
GAGTCCGTGG CCTGGCTGGA GCACCACCTC CAGCAATACG AAGGTACGGT CATCGCTGTG
ACCCACGACC GGTATTTCCT GGACAACGTG GCCGGCTGGA TTCTGGAATT GGATCGTGGC
CGGGGCATCC CCTGGCAGGG CAACTATTCC TCCTGGCTGG AACAAAAACA GCACCGCCTG
GCCCAGGAAG AAAAACAGGA AACCGCCCGC CAAAAAACCT TGCAGCACGA ATTGGAATGG
ATCCGCATGT CCCCCAAGGG CAAGCGCTCC AAATCCAAGG CCCGGATCAG TGCCTACGAG
AGTCTGCGCA ACCAGGGCCC GCCGGAAAAG GTCAAAGAGA TGGAACTCTA CATCCCGCCC
GGACCCCGTT TGGGCGATGT GGTCATCGAG GCCGACCACG TCCGCAAGGG TTACGAGGAC
CGCCTTTTGA TCGAGGATAT GAGTTTTCTC CTGCCTCCTG GCGGCATCGT CGGGGTCATC
GGCCCTAACG GCGCTGGCAA GTCGACCCTG TTCGATCTCA TCACCGGGCG CGAGGAGCCT
GATGACGGCC GCATCCGCCT CGGCGACACG GTCCAGCTCG CTTATGTCGA CCAGGAGCGC
GAGACTCTGG ACCCGGAAAA AACGGTCTGG GAAATGGTCT CCGACGGCTT CGACACCATT
CGCCTCGGCG GCCGGGATAT CAATTCCCGG GCCTATGTCG GCAAATTCAA CTTCACCGGC
GGCGATCAAC AGAAAAAGGT TGGGGTGCTT TCCGGCGGAG AGCGCAACCG GGTCCACCTG
GCCCTGATGC TCAAGCAGGA GGCCAATGTC CTGCTCTTGG ACGAGCCGAC CAACGATCTG
GACGTGAACA CCATGCGCAC CCTGGAAGAA GGGTTGGAGC ACTTCGCTGG TTGCGCCATG
ATCATTTCCC ACGACCGCTG GTTTCTGGAC CGCGTGGCCA CGCACATCCT GGCCTTCGAG
GGAGACAGTC AGGTCGTCTG GCGCGAGGGC AACTACTCCG AATACGAACA GGACCGGCGC
AAACGGCTGG GCAAAGACGC GGAGATCCCC CGGCGCATCC GCTACCGCCG CCTGACGCGG
TAA
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| Protein sequence | MSDEPNKVIY SMVRVSKYHN RRAVLQDISL SFFYGAKIGV LGLNGSGKSS LLRIMAGVDT
DYNGEIVASP GYSIGFLEQE PQLDPDKTVR EVVEEGVAET AALLNEFNEI NARFAEPMSD
DAMQKLIERQ GEVQELLDAH DAWDLESRLE MAMDALRCPD GQNPVNILSG GEKRRVALCR
LLLQKPDILL LDEPTNHLDA ESVAWLEHHL QQYEGTVIAV THDRYFLDNV AGWILELDRG
RGIPWQGNYS SWLEQKQHRL AQEEKQETAR QKTLQHELEW IRMSPKGKRS KSKARISAYE
SLRNQGPPEK VKEMELYIPP GPRLGDVVIE ADHVRKGYED RLLIEDMSFL LPPGGIVGVI
GPNGAGKSTL FDLITGREEP DDGRIRLGDT VQLAYVDQER ETLDPEKTVW EMVSDGFDTI
RLGGRDINSR AYVGKFNFTG GDQQKKVGVL SGGERNRVHL ALMLKQEANV LLLDEPTNDL
DVNTMRTLEE GLEHFAGCAM IISHDRWFLD RVATHILAFE GDSQVVWREG NYSEYEQDRR
KRLGKDAEIP RRIRYRRLTR
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