| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0842 |
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| Symbol | |
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| ID | 8418661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 998477 |
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| End bp | 999001 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645037411 |
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| Product | transcriptional regulator, CarD family |
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| Protein accession | YP_003197711 |
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| Protein GI | 258404969 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000502927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.471539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCAG AAAAACAATT GGTGGTGTAC CCGGCTCAGG GAGTCGGCGA AGTCGAACGG
ATAGAAAGTC AGGAAATCGG CGGGACGCGA GCCGATTTTT ATATTGTCCG CATACTCAGT
AATAATGTGA CCTTGATGGT GCCGGTGGCG AATGCCGAAA ATGTCGGCCT GCGATCGGTG
TGCGGGGCTG ACGAGGGCCG TCTGGTTCTG GAAGGGCTCA AGGACCGCTC CGATTTTATG
GGATACAGCG GTCAGAATTG GAACCGCAGG TATCGGGAAT ATTCTGAGAA ATTGAAAAGC
GGCGAATTGG ATGATGTCTC CTATGTGCTC AAGGAATTGA TCCTTATAGG TAGAGACAAG
GAGTTATCGT TTGGGGAGCG GCGGTTGCTT GAGCAGGCCA TGACCCTGAT CACTATGGAA
ATCGCCTACG CTTTGGGAAC GCAACAGGAC GCCGTGCGTA AAGAAATCGA GGAGATATTC
GCTGATATTC TCAAACGTCC GGGTGCGGAT GAAGAGGATG TATAG
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| Protein sequence | MFSEKQLVVY PAQGVGEVER IESQEIGGTR ADFYIVRILS NNVTLMVPVA NAENVGLRSV
CGADEGRLVL EGLKDRSDFM GYSGQNWNRR YREYSEKLKS GELDDVSYVL KELILIGRDK
ELSFGERRLL EQAMTLITME IAYALGTQQD AVRKEIEEIF ADILKRPGAD EEDV
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