| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0840 |
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| Symbol | |
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| ID | 8418659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 996900 |
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| End bp | 997541 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645037409 |
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| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
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| Protein accession | YP_003197709 |
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| Protein GI | 258404967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000371486 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.662472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAGG AAATACGTTT ACAAGCTTTC AAGCGGGATG AAGTTGGCAA ACAGGGCCTA
CGGTCCGTCC GCCAGCAAGG ATATATTCCC GGTATCTATT ATGATGCCAA GGGCGACAAC
GTCCCGGTCA AAGTCCGCTA CCGGGCTTTG GAGTCGGCCT TCCGAAAGGC CCACTCAAAC
CACGTTATCC AGTTGGAGAT CGCCAACGGG GGGCAAGGCA CGCCCCGTCC GGTCATGATC
TGGGATATCC AGCACCACCC GGTCAAAGAC CTCATTCTCC ATGTCGATTT TTTCGGGGTG
GACATGAGCA AGGAAATTCA GGTCGAAATT CCCGTGCAGA TCGAGGGAGA GGCTCAAGGT
GTTGTGGATG GCGGCCAATT GACCGTGTAC CATGAGGCGC TGCTTGTTTC CTGTTTGCCG
GACGCGATTC CTGAAAATAT TCGCATTGAT GTCTCCGCGC TGGAGATGAA CGAGAATGTG
AACATTGAGG ACGTGACCTT TCCTGAAGGG GTGGTTCCGG TCTACGACGG CGAGGAAAAT
TTTGCTGTGG CTGGTGTCAA CCCCATCGTT GAGGCCTCTT TGGAAGAAGA GGAAGAAGAA
GCCGAAGGCG AAGCTCCAGC TGAAGAAGCC GAAGAAGAAT AA
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| Protein sequence | MSEEIRLQAF KRDEVGKQGL RSVRQQGYIP GIYYDAKGDN VPVKVRYRAL ESAFRKAHSN
HVIQLEIANG GQGTPRPVMI WDIQHHPVKD LILHVDFFGV DMSKEIQVEI PVQIEGEAQG
VVDGGQLTVY HEALLVSCLP DAIPENIRID VSALEMNENV NIEDVTFPEG VVPVYDGEEN
FAVAGVNPIV EASLEEEEEE AEGEAPAEEA EEE
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