| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0838 |
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| Symbol | |
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| ID | 8418656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 994942 |
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| End bp | 995811 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037406 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritolkinase |
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| Protein accession | YP_003197707 |
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| Protein GI | 258404965 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0783788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.511504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCTG TGCCCCATCA GCAGCAGGCC CCTGGATGCA AGGCGAATCT GTACTTGCGC
ATCACAGGCC AGCGCGAGGA CGGTTACCAC GAACTGGAAA GTCTTTTCCT CCCCTTGCAG
CAGCCTTCGG ACCAGATCCA TTTCGAACCC GGTGCTCCGG GTAGCGGTTT GACATTGACC
TGCTCGGATC CCGACCTTGC AACACCCTCG AACAGTATTC GGGTCGCGTA TGAAACTTTT
CGGAGCGTGA GCGACAAGGC ACCAGATCTC CGGATTCATT TGGACAAACA GGTTCCCCAA
GGGGCGGGCC TCGGAGGGGG CAGCGCCGAC GCCGCCTGTG TTTTACAGTA TCTCCATGCC
CATGTGTGTC CAGGTCTGCC TGAACAGGAC CTCCAGCGGC TCGCTTTGCA GGTCGGCGCT
GATGTCCCGT TCTTTTTGCA CCGTCAGCCG TGCTGGGTCA GTGGCATTGG CGAACGGTTG
GAGCCGTTAC CGGTCTCTTT TGCTCAGTGG CGATTTCTGG TTGTCTGTCC TGACGTCAGT
ATTTCAACCG GTTGGGCCTA CCGCATTTGG GATGAGATGC AGTCCGCCTT TCAAATTCTC
CGCCAGGAAG ACTTGACAAG TCCACGACAT GCGTATAGAC AATGCTGCTC CAGCGGCGCA
TTGGTTCTTT ACAATAGTTT CGAGCAGGCC GTTTTTCCTT ACTTTCCAGA GCTTGGGAAG
CTGAAGCAGG CCCTTCTGGC CGCTGGAATG GACGCCTGTG TGATGAGTGG TTCCGGCTCA
GCCCTTGTCG GCTTGACACG GAACGCGATG ACATTAGAAT CTGTCTGCTC GAAGTTGGAA
GCCCGCCGGG TTTCTTTTTA TGCCATCTGA
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| Protein sequence | MAPVPHQQQA PGCKANLYLR ITGQREDGYH ELESLFLPLQ QPSDQIHFEP GAPGSGLTLT
CSDPDLATPS NSIRVAYETF RSVSDKAPDL RIHLDKQVPQ GAGLGGGSAD AACVLQYLHA
HVCPGLPEQD LQRLALQVGA DVPFFLHRQP CWVSGIGERL EPLPVSFAQW RFLVVCPDVS
ISTGWAYRIW DEMQSAFQIL RQEDLTSPRH AYRQCCSSGA LVLYNSFEQA VFPYFPELGK
LKQALLAAGM DACVMSGSGS ALVGLTRNAM TLESVCSKLE ARRVSFYAI
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