Gene Dret_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0828 
Symbol 
ID8418646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp978857 
End bp979207 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content53% 
IMG OID645037396 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_003197697 
Protein GI258404955 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.359772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGG CTTTCGTTTA TATCACAACC CGGGACAGGG AAGAGGCGGC TCGCATTGCC 
CGAGTTTTGC TGCAGGAACG TCTTGTAGCC TGCGTCAACG TCCTCGGGGA AGTGGATTCG
TATTTTTCCT GGCAGGGCCA AGTGCAAAAT GAAGGTGAAG TCGTTTGTTT TGCCAAGACG
CGTGAGACGT TAGTCCCCGA AGTGACTGAA ACCGTGCAGA ATATCCACAG TTATAGCTGC
CCCTGTGTTG TCGCTTTGCC CATAGCGGGC GGCAATCCGG AGTTTTTGGC CTGGATTGAG
GATTCCACCC GCAACCCAGG CCCTTCGCAA GAACCAAAGG AATACCTATG A
 
Protein sequence
MSMAFVYITT RDREEAARIA RVLLQERLVA CVNVLGEVDS YFSWQGQVQN EGEVVCFAKT 
RETLVPEVTE TVQNIHSYSC PCVVALPIAG GNPEFLAWIE DSTRNPGPSQ EPKEYL