| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0823 |
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| Symbol | |
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| ID | 8418641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 972652 |
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| End bp | 975093 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037391 |
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| Product | peptidase S16 lon domain protein |
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| Protein accession | YP_003197692 |
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| Protein GI | 258404950 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.112551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.517782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA AACCCCTGCA GGCAGATGAA GTGTCCTGTC CATGTACAAA AGCCCATTTT
GCGTTCGCCA GCACCGAAGA GGTTCTGCCC CTGAATGAAA AGGGGCATGC CCTGGGACAG
CCGAGGGCCC AGGCTGCTTT GGAGTTCGGG ACTCACATCC GGCGCCACGG GTACAATATT
TTTGCCCATG GCGCCCCTGG AAGCGGCCGG CATAGTCTGG TCCGGCAGAT GCTCAGACAG
CAGGCGGCCA CCGAGGAAGT GGGGCACGAC TGGTGTTACG TCAATAATTT CGACGACCAG
ACCAGCCCGG CAGCCCTGTG TCTGCCACCG GGCCTTGGCC GTTCTCTGGC GGAGGATATG
GATCGTCTCA TTGACGAAGT ACGCAATGCC CTCAAGTCCG CTTTTGAAAG TGAAGAATAC
CAAAATCGGA TGCAGTCCCT GGAGCAGGAG CTCAAAGACA AGCAGAACAC CATTATCCAG
GAATTGCAGG AAAAGGCCCA GGAAAAAGGG TTGCGTCTCA TCCGAACTCC CTCGGGTTTG
GCTTTTGCTG CTGTCCGCGA TGGGGAAGTC CTGCCCCGGG AGGAGTTCCA GAAGCTTTCA
GAAGAAGAAC GGAAAAAGAT CGAGCAGGAT ATCCAGGAAT TGCAGCAAGA ATCCCATCGG
CAATTCCAGA AATTGCCGGG ATATGAGCGT CGAGTCCGGG AAAAAATGCG ATCGTTAAGC
CGTGAAATGG CAGATTACGC CATCGGGACA TTGTTGGAGG AAATGCGCGA GAAGTATGGT
CATCTCGACG ATGTACTTGA GCATATCAAT GCGGTGCAAA AGGATATTGT CGATAGTGTC
CCGCGCATCC TCAATCCCGA GGGCGATGAC CAGCAGGGCG ACCAGTTTTG GAGCGAGCGC
CAGGAGTCCA TGACCTCACC GGCAGTCCGG CGCTACCGCA TTAATGTTCT GGTCGATCGT
AGCGACCATG CCAACGCCCC GGTCGTCTAT GAGGACAATC CCTCCTTGAG TAACCTTTTA
GGGCGCGTGG AGCACCAATC GCAGATGGGC ACCCTGGTGA CGGATTTCAA TCTTATCAGG
GCCGGCGCCC TGCACCGGGC CAACGGGGGG TACCTCATTC TGGACGCTGA GAAGCTTCTG
ACCCATCCGG GTGCCTGGGA AGCGTTGAAA CGGGCCTTGC AATCCTCAGA AATCAAATTG
GAAAGCCTGG CCCAGATGTA CAGCCTCATC AGCACGGTTT CACTCGAGCC ACAGCCTGTT
CCACTGGATG TCAAAGTTGT GCTGGTCGGC AGTCCGTTTG TTCACGCGCT CTTGCAGTAC
TATGATCCTG AATTTGATAC GCTTTTCAAG GTCGCTGCTG ATTTTGCCCC GGATATGGAC
CGCACCGCGA ATCAAGAAGG ATTTGCCCGC CTGGTGTCTG GCTTTGTGCA TAAACACAGT
CTCCACCATT TCACGGCCAG CGGCGTGGCC CGCCTGTTTG AATACAGTCT GCGGCTTGCC
GGGGACCGTG AAAAACTGTC TGCCAATGTC CGGCAACTCG AGGATATGGC CGTGGAGGCC
GATTATTTTG CTGGCCAAAA GGGAGAGGCA TTGGTCCGGT CCGAGGAAGT CCAGCGGGCC
ATTGATGAAC GCCAATTCCG CTCCGACCGT ATCCGGGAGC GCCTGCAAGA GGAAATCTTT
CGCGAGACTT TGCTCATTGC CACACAAGGA TCCCAGGCCG GTCAGATTAA CGGGTTGTCT
GTCTACCAGG TCGGGGGATT GTCCTTTGGC CGTCCTAGCC GCATTACGGC CCGTATCCGG
TTGGGGCGCG GGGAGGTGGT CGATATCGAG CGCGAATCGA AACTCAGTGG GCCCCTGCAT
TCCAAAGGAG TCCTCATCCT GACCGGTTTT TTGAGCGGCC GCTTCGGTGT TCATCAGCCT
CTCTCCTTGA GCGCGAGTCT CGTCTTTGAA CAATCCTACG GCGGTGTGGA TGGCGATTCC
GCCTCGTCGG CTGAACTCTA TGCCCTGCTG TCGGCAATTG CCGGTGTCCC CTTGCGACAG
GACCTCGCTG TGACCGGGGC GGTCGATCAG CACGGCCAGA TTCAGGCGAT CGGCGGAGTC
AACGAGAAAA TCGAAGGATT TTATGATATT TGCCAACAAC GCGGATTAAC AGGCCAGCAA
GGAGTTTTGA TTCCCGCCTC CAACCGCAAG CACTTGGTTT TACGCGGCGA TGTCGTTGAG
GCGGTACGCC AGGGAGGCTT TTCCATCTAC CCGATCCGGA CCGTTGATGA GGGCATAGAA
CTTTTGACCG GCATGGAGGC CGGAAGTCTG GATTCCCAGG GAAACAGCCC TTCGGGCAGT
TTCAACGCCC TGGTCATGGA TCGTTTGAAA ACGCTCGCCG CCCGCCGACA GGCGTTCGTT
GCTTCAGCAC CGGACGACAG GGGGGATGGC CATGGCGAAT AA
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| Protein sequence | MQIKPLQADE VSCPCTKAHF AFASTEEVLP LNEKGHALGQ PRAQAALEFG THIRRHGYNI
FAHGAPGSGR HSLVRQMLRQ QAATEEVGHD WCYVNNFDDQ TSPAALCLPP GLGRSLAEDM
DRLIDEVRNA LKSAFESEEY QNRMQSLEQE LKDKQNTIIQ ELQEKAQEKG LRLIRTPSGL
AFAAVRDGEV LPREEFQKLS EEERKKIEQD IQELQQESHR QFQKLPGYER RVREKMRSLS
REMADYAIGT LLEEMREKYG HLDDVLEHIN AVQKDIVDSV PRILNPEGDD QQGDQFWSER
QESMTSPAVR RYRINVLVDR SDHANAPVVY EDNPSLSNLL GRVEHQSQMG TLVTDFNLIR
AGALHRANGG YLILDAEKLL THPGAWEALK RALQSSEIKL ESLAQMYSLI STVSLEPQPV
PLDVKVVLVG SPFVHALLQY YDPEFDTLFK VAADFAPDMD RTANQEGFAR LVSGFVHKHS
LHHFTASGVA RLFEYSLRLA GDREKLSANV RQLEDMAVEA DYFAGQKGEA LVRSEEVQRA
IDERQFRSDR IRERLQEEIF RETLLIATQG SQAGQINGLS VYQVGGLSFG RPSRITARIR
LGRGEVVDIE RESKLSGPLH SKGVLILTGF LSGRFGVHQP LSLSASLVFE QSYGGVDGDS
ASSAELYALL SAIAGVPLRQ DLAVTGAVDQ HGQIQAIGGV NEKIEGFYDI CQQRGLTGQQ
GVLIPASNRK HLVLRGDVVE AVRQGGFSIY PIRTVDEGIE LLTGMEAGSL DSQGNSPSGS
FNALVMDRLK TLAARRQAFV ASAPDDRGDG HGE
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