Gene Dret_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0817 
Symbol 
ID8418635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp965449 
End bp966003 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content54% 
IMG OID645037385 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003197686 
Protein GI258404944 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGTC AAGCCTATCA GGAAATAGCG CCCCGCCTCA GGGGGCTTCG TGAAGCTCTG 
GAATTGGAAA CCGAGGAAAT GGCCGCTGAT CTCGGTGTCG ACGCCGACAC CGTTCGGAAT
TACGAGTCTG GTGCGGGCGA AATTCCGGTC AGCTATCTTT TTCAAGTGGC CCAGCAATAT
GACATTGATC TGACAGTGCT TATTTCTGGA GATGAGGCCC ATCTCCATAA TTATTCGGTG
GTGCGCAAAG GGCGTGGAAT GAGCGTCGAG CGCCGCAAGG ACTACGACTA CAAAAGTCTG
GCTTATCGTT TCACTGGGCG TCGTATGGAA CCCTTTCTGG TCAGTGTGCC ACCCAAGAGC
GACGATGCAT TGACCTTTCA TGAGCACGCG GGGCAGGAAT TCATCTACAT GCTCGAGGGG
CGCCTCGAAA TCCGTCTAGG CACGAATACG GAAATCCTGG ACCCCGGAGA TTCCCTGTAT
TTTTCGTCGC GCACACCGCA CGCCCTCCGG TCATTGTCCG AGCAACCGGC CCAATTTCTG
GATGTCATTA TTTAG
 
Protein sequence
MSSQAYQEIA PRLRGLREAL ELETEEMAAD LGVDADTVRN YESGAGEIPV SYLFQVAQQY 
DIDLTVLISG DEAHLHNYSV VRKGRGMSVE RRKDYDYKSL AYRFTGRRME PFLVSVPPKS
DDALTFHEHA GQEFIYMLEG RLEIRLGTNT EILDPGDSLY FSSRTPHALR SLSEQPAQFL
DVII