| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0799 |
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| Symbol | |
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| ID | 8418617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 945789 |
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| End bp | 947786 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037367 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_003197668 |
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| Protein GI | 258404926 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.298665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.975396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGA ATTTTCAACT CGTGACCGAT ATGGTGCCTA AGGGGGACCA GCCCAAAGCT
ATTGAAAAGT TGTGCGCCAA TCTGGAGGCC GGCGTCAGCG ATCAGGTCCT GTTGGGCGTC
ACCGGTTCGG GCAAGACATT TACCGTCGCC AATGTCGTGG CCCGTTTGAA CCGCCCGACG
CTGGTCATGG CTCCCAACAA AACGCTTGCC GCCCAATTGT ACAGTGAATT CAAAGAACTT
TTTCCTAACA ACGCTGTTGA GTACTTCGTC AGCTATTACG ATTATTACCA GCCTGAAGCC
TATCTGCCCC ATTCCGATAC CTACATTGAA AAGGACTCCT CAATTAATGA AGATATCGAC
AAGCTGCGCC ATGCCGCCAC CCATGCCTTG TTGACCAGAC GGGATGTTCT CATTGTCGCT
TCGGTATCCT GTATATATGG GCTCGGCTCA CCGGAATATT ACGAAAAAAT GGTCGTGCCT
GTTCATGTGG GGCAAAATCT GGCCATGGAC CAACTCATGT CTCGGCTTGT TGAAATCCAA
TATGAACGAA ACGACTATGA TTTTCATCGG GGCACATTTC GGGTACGGGG CGATGTCCTG
GAGTTGATCC CCGCCTATCG GCATGAGCGT GCCCTCAGAA TCGAGTTTTT CGGCGACGAA
ATCGACGCTC TGTATGAGAC GGACCCCTTG ACAGGGGAAG TTTTGGGCCC TCAGGAAAAG
GCCCTTATTT TTCCCGGCAG CCACTATGTT TCGGACCAGG AGAATCTCAA GCGGGCCATT
GACGATATCC GCGATGAACT CCGTGCCCGG CTCACCTGGT ATCGCGAGGA GAATCGACTG
GTCGAGGCTC AGCGTCTGGA GCAGCGCACT CAGCTTGATC TGGAGATGAT CGAGGAATTG
GGATATTGCA ACGGCATTGA AAATTACTCG CGCCATCTTG ACGGCCGCGC ACCCGAGTCG
CCGCCTTCGT GTCTGCTGGA TTATTTCCCC TCCGATTTTT TGCTCTTTCT GGACGAATCG
CATGTGTCAG TGCCCCAGAT CGGTGGCATG TTCAACGGGG ACCGGTCCCG CAAACAAACC
CTGGTTGATT TCGGATTCCG TCTGCCCTCG GCTTTGGACA ACCGACCACT CTCGTTTGAC
GAGTTTCTGA AGCGGCTCAA TCAGACGGTG TATGTTTCCG CCACGCCCGG CAATTGGGAG
CGCGACCGCG CCAGTGGCGA GATTATTGAA CAGGTTATTC GCCCCACTGG CCTGTTGGAT
CCCCAGGTTG AAGTGCGACC CACCGGGGGC CAGATGGATG ACCTGCTTGC TGAATGCCGC
CAGCGCATGG ACAAGGACGA ACGGGTTTTG ATCACGACCT TGACCAAACG GTTGGCTGAG
GATTTGACCG AATTTCTCCA TTCCCGTGGC GTTCCGTCAC GTTACATGCA CTCGGATATC
GACACTCTGG AGCGCGTGGA GATCATCCAG TCACTGCGCC GTGGAGATTT TCACGCCTTG
GTCGGCATCA ATCTTTTGCG CGAAGGGCTC GATCTGCCGG AAGTGTCGCT GGTGGCTGTT
CTCGACGCGG ATAAGGAGGG GTTTTTGCGC TCGGCGCGCT CCTTGATCCA GACCTTTGGA
CGGGCCGCTC GCAATCGCAA TGGGTGTGTG CTGCTGTATG CCGATAAAAA GACCCCGGCC
ATGCGCGAAG CTATGGATGA AAGCCACCGC CGCCGCTCCC TGCAGGAAGC CTTCAATCTT
GAGCACGGGA TTACTCCCGA GAGTATCCGC AAGCGCTCCG GCCATGCCCT GGCCCATGCA
GGCAAGGAGC AAAGCGAGAT GGCCAAGGCC GCCGAGACCA CGAGTTCTTA CGGCAGTGAC
CCCCAGAAGT TGGAAAAGGC CATCGCCCGG CTGGAGCGGG AGATGCGACA GGCGGCCAAG
GATCTCGCCT TTGAGCGGGC GGCTTCCTTG CGCGACGAGG CCCAACGGTT GCGGCAAACT
CTGGTGGAAA TGGGGTGA
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| Protein sequence | MKENFQLVTD MVPKGDQPKA IEKLCANLEA GVSDQVLLGV TGSGKTFTVA NVVARLNRPT
LVMAPNKTLA AQLYSEFKEL FPNNAVEYFV SYYDYYQPEA YLPHSDTYIE KDSSINEDID
KLRHAATHAL LTRRDVLIVA SVSCIYGLGS PEYYEKMVVP VHVGQNLAMD QLMSRLVEIQ
YERNDYDFHR GTFRVRGDVL ELIPAYRHER ALRIEFFGDE IDALYETDPL TGEVLGPQEK
ALIFPGSHYV SDQENLKRAI DDIRDELRAR LTWYREENRL VEAQRLEQRT QLDLEMIEEL
GYCNGIENYS RHLDGRAPES PPSCLLDYFP SDFLLFLDES HVSVPQIGGM FNGDRSRKQT
LVDFGFRLPS ALDNRPLSFD EFLKRLNQTV YVSATPGNWE RDRASGEIIE QVIRPTGLLD
PQVEVRPTGG QMDDLLAECR QRMDKDERVL ITTLTKRLAE DLTEFLHSRG VPSRYMHSDI
DTLERVEIIQ SLRRGDFHAL VGINLLREGL DLPEVSLVAV LDADKEGFLR SARSLIQTFG
RAARNRNGCV LLYADKKTPA MREAMDESHR RRSLQEAFNL EHGITPESIR KRSGHALAHA
GKEQSEMAKA AETTSSYGSD PQKLEKAIAR LEREMRQAAK DLAFERAASL RDEAQRLRQT
LVEMG
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