| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0771 |
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| Symbol | |
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| ID | 8418587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 913243 |
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| End bp | 914385 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037338 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_003197641 |
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| Protein GI | 258404899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCT ACGATTCAGT GAGCAAAATC TATGGTTCCG GGCCAGGCGC TGTAACGGCC
CTGGATAATG TGTCCTTTCA TATTGAAAAA GGCGAGGTGG TGGTTTTTCT CGGCCCATCG
GGCTGCGGCA AAACCACCAC CTTGCGCCTG ACCAACCGCC TGGACAGCAT CACCCGAGGG
ACCATTACCA TTGGGGGGCG CGACATCAAT GAACAGGATC CTGTCCGACT GCGCCAGTCC
ATGGGCTATG TCATTCAGGA AATCGGGCTC TTTCCCAACA AGACCATTGC CCAGAACATC
GCTGTCGTCC CTCGCATGCT CGGTTGGTCC AAGGACAAAA TCTCGGAACG CACCGATGAG
CTCCTGCGCA TGGTCCAGTT AGATCCAGCT TTGTATCGGG ACCGCTATCC GGCCGAACTC
TCCGGCGGTC AGCAACAGCG AATCGGAGTT GCTCGGGGGC TGGCCGCCGA TCCAGAGATC
CTGCTAATGG ACGAACCCTT TGGAGCCATC GACCCTATCA ACAGGGAACA AATTCAGGAT
GAATTTCTGA AGGTCCAGGA AAAACTGAAA AAAACTATCG CCTTTGTTTC CCATGACATC
CACGAAGCGA TCAAGATGGG GGATAAAATC GCTCTTTTCA GTGAGGGTCG CCTCATCCAA
TACGATACCC CGGAAATGAT CCTGACCCAG CCCAAAAACA AATTTGTGGC CGACTTCGTC
GGCTCCGACA GGGCCCTCAA AGTGCTGGGA TTGATGCGGG TCCGCGATGC CATGAACCCT
GTGCCGCTGA ACATCATCCA GGGCGACACC CTGGCTCCGG CAGCCATAGG CTTTCTGGAG
GAGAAAAAAC GCCGCTACGG CGTCGTCGTG GACGGGGGCA AGCCGGTTGG CTTCGTATCC
CTCAAGGACC TCAAGTTTGA AACCGGCCCT GTGCGTGACG TGGCCACCCC CTTTCCGGTC
ATGGCCCAGG GCCGTCAACC GCTCCGCGAC GCCCTGTCCA TGATGCTCAT GCACGACCTC
ATTTTGCTCT GCGTCATCGA CGGCAACGGC GACTTCATCG GCACCGTCAG CTATCAAAAC
ATCCAGCGAG CCATCTTGGA CGTCTATTCC GATGAGACCG AAGACCGGGA CGTGACCCGC
TAA
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| Protein sequence | MITYDSVSKI YGSGPGAVTA LDNVSFHIEK GEVVVFLGPS GCGKTTTLRL TNRLDSITRG
TITIGGRDIN EQDPVRLRQS MGYVIQEIGL FPNKTIAQNI AVVPRMLGWS KDKISERTDE
LLRMVQLDPA LYRDRYPAEL SGGQQQRIGV ARGLAADPEI LLMDEPFGAI DPINREQIQD
EFLKVQEKLK KTIAFVSHDI HEAIKMGDKI ALFSEGRLIQ YDTPEMILTQ PKNKFVADFV
GSDRALKVLG LMRVRDAMNP VPLNIIQGDT LAPAAIGFLE EKKRRYGVVV DGGKPVGFVS
LKDLKFETGP VRDVATPFPV MAQGRQPLRD ALSMMLMHDL ILLCVIDGNG DFIGTVSYQN
IQRAILDVYS DETEDRDVTR
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