| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0768 |
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| Symbol | |
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| ID | 8418584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 910883 |
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| End bp | 911794 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037335 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003197638 |
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| Protein GI | 258404896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.24503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.731263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACA TTCCCCGTTC ATTTCTGACC CTTGTCTTGA GTGCCCTGGT GCTCATGGCC
GGTAGTACCA CGCTGAACGC CTCGCCGCTC ATCGTGGGCG GTAAGAATTA TACTGAACAG
TATATCCTTG CCGAATGCGC CCAAATCCTC CTCGAAGACG CGGGAATCGA AGCCAAGACC
AAGACCGGCG TCGGTTCCGC CCTGGCCCGT AAATCCCTCG TCAATGCCCA GTTTGATCTC
TATTTCGAAT ACACCGGTAC GGCCTACACC GTGTATTACG AGCAAGACGA CCAGGCGGTC
ATGACTCATC CGGACAAGGT CTACGAGTGG GTCAAAAGCC ACGATGCCGA CAAGAATCTG
GTCTGGCTCG ACCCGATCCA GTTCAACAAC ACCTACACCT TGATGATGCG CGAAAAACAG
GCCGACGCCC TGGGCATCAC CAGTATCTCC GATTTCGGCG CCTATGTAGA CGACAACCCG
GATGAACTGC TCTTTGCCAC AGACGTGGAA TTCTGGGAAC GTCCAGATGG GTTCAAGGCC
CTGATGCGCA CCTATGACTT CCGCATGCCG ATCGATCAGA TCAAAAAGAT GTCCACGGGA
CTGACGTACA AGGCCTTGCG TGAAGGCCAG GCCGACGTGG CCATGGGCTT TTCCACCGAC
GGTCGCATCG CGGCTTTCGG ATTCGTCCTC CTCGAGGACG ACAAGCAGTT CTTTCCCGTC
TACAATCCTG CGCCGGTCGT TCGAAAGGAC GTTCTCGAAC AATACCCCGA AATTCGGGAC
ATATTGAAAC CGCTGGCCCA AAAGCTGGAT ACCAACCAGA TGCAGCAACT CAACAAGGCA
GTGGATGTCG ACCACAAAGA GCTCAAGGCA GTGGCCACTC AATGGCTCCA GGACAACGGC
CTGATCGAAT AA
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| Protein sequence | MFNIPRSFLT LVLSALVLMA GSTTLNASPL IVGGKNYTEQ YILAECAQIL LEDAGIEAKT
KTGVGSALAR KSLVNAQFDL YFEYTGTAYT VYYEQDDQAV MTHPDKVYEW VKSHDADKNL
VWLDPIQFNN TYTLMMREKQ ADALGITSIS DFGAYVDDNP DELLFATDVE FWERPDGFKA
LMRTYDFRMP IDQIKKMSTG LTYKALREGQ ADVAMGFSTD GRIAAFGFVL LEDDKQFFPV
YNPAPVVRKD VLEQYPEIRD ILKPLAQKLD TNQMQQLNKA VDVDHKELKA VATQWLQDNG
LIE
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