Gene Dret_0767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0767 
Symbol 
ID8418583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp909599 
End bp910621 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content60% 
IMG OID645037334 
Productglycosyl transferase family 2 
Protein accessionYP_003197637 
Protein GI258404895 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0444656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.813996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCTC ACTTTTCCAC ACTCAGTGTT CTTCTTCCGG TCTATAACGG CGCAACGACC 
CTTCCAGCAG CCCTGGACAG CCTTCTGGAT CAGACCCGGC CCGATTTCGA GGTCGTGGCT
GTGGACGATG GTTCGACCGA CGACACAGCC ACAATCTTGG AGCGCTACGC CCAACGCGAC
CCCCGTATCA AACCGATTTT CTCAGCCCAC AACGGCATCG TCGGCGCGCT GAACCTGGGC
CTCACACACT GCAATGCTCC TTATATCGCG CGCATGGACT GCGACGACAT CAGCCACCCC
CAACGCCTGG AACGCCAGGC AGACTGCCTG GAAAGCCAGA CGGATATTGA CCTGATCTCC
TGCCGCGTAG AGTTTCCCCG TTGCCGAGCC AATTCGGGCT ACGCCCGTTA CGTCGACTGG
ACCAACCACG TCTGCACCCC GGACCAAATC CGCAATCTGC GTTTCATTGA ATCCCCTTTC
GCCCACCCCT CGGTCATGTT CAGAGCCGAA CTCGTCCACC GTTTCGGGGG ATATGCCGCG
GGCGTTTTTC CCGAAGATTA CGAATTGTGG CTGCGGTGGC TCGACAACGG CGTCAATATG
GCCAAAACCC CAGAAACTCT GCTCACCTGG AACGATCCCC CTGACCGCCT CTCCAGGACC
GATCCGCGCT GCAGCACTGA GGCGTTCTAC CGCATCAAGG CTCACTATCT GGCCAAATGG
CTGCAGACTC ACAATCCACA CCACCCGGAC ATCGTTGTCT GGGGGGCCGG ACGCAAAACC
AGGCAGCGGG CTTCGTTGTT GACCGAGCAA GGCCTTCGCA TCCGGGCTTT TATCGATGTT
GCTCCAAACA AGATCGGCCG CCCCATTCAC GGCATTCCGG TCTGGGGACC CCACGACCTT
CCTGCGCCGG GAAGCTGTTT TGTCGTACCT CTGGTCGCCT CCCGCGGCGC CAGGACAACA
ATCATGCGCT TTCTCGGCAC GCAGGGTTAC ACCCTCGGCA TCAATATCAT TCCCGCTGCA
TGA
 
Protein sequence
MAPHFSTLSV LLPVYNGATT LPAALDSLLD QTRPDFEVVA VDDGSTDDTA TILERYAQRD 
PRIKPIFSAH NGIVGALNLG LTHCNAPYIA RMDCDDISHP QRLERQADCL ESQTDIDLIS
CRVEFPRCRA NSGYARYVDW TNHVCTPDQI RNLRFIESPF AHPSVMFRAE LVHRFGGYAA
GVFPEDYELW LRWLDNGVNM AKTPETLLTW NDPPDRLSRT DPRCSTEAFY RIKAHYLAKW
LQTHNPHHPD IVVWGAGRKT RQRASLLTEQ GLRIRAFIDV APNKIGRPIH GIPVWGPHDL
PAPGSCFVVP LVASRGARTT IMRFLGTQGY TLGINIIPAA